Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1559 ATGGCGCTCCGCACCTTCATAGTCCGTAGGACCCAAGACGACATTCACAGCGACACTTGGAGAGCCGCTCTCTCCGAATTCATCTCCACACTCATCTTTGTCTTCGCTGCCTCCGGCTCCACCATCGCCGTCAAAAACCTCAGCGCCGACGCGCCCACCGCTCTCGTCATCGTCGCCGTTGCCAACGCCTTCGCCCTCTTCGCCGCCGTCTCCGTCAGCACAAACGTCTCCGGCGGCCACGTCAACCCCGCCGTCACCTTCGGCTTTTTCGTCGGCGGCAACCTTACCTTGCTCCGCTGCATCCTCTTCTGGATCGCTCAGATCCTCGGCTCCGTCATCGCTTGCTTGCTTCTCAAATTCACCTCCGGCGGACAGAGAGTACCGGTTTTCGGACTTTCGAGTGGTGTGAAAGTGGGAAACGCTTTGGCGTTGGAGATGGTGATGACCTTTGGATTGGTGTACGCGGTATATGCTACTGCCGCTGACCCCAGGAGCAGAAGGAATAGTTTGGGAACGATAGCGCCAATTGTGATTGGCTTAATCGTTGGAGCGAATATTTTGGTGGCTGGGCCTTTTGATGGGGGCTCCATGAACCCGGCTGCGGCGTTTGGGCCTGCACTGGTGGGCTGGAACTGGGAAAACCATTGGGTTTACTGGGTTGGGCCTCTCGTTGGTGGTGGGCTTGCTGGGTTTCTTTATGAGTTGGCTTTTGTTAGCTCCACCCGTCAGAGGTTCCGCAGAGATTACCGTAATTATTATTGA 762 0.5643 MALRTFIVRRTQDDIHSDTWRAALSEFISTLIFVFAASGSTIAVKNLSADAPTALVIVAVANAFALFAAVSVSTNVSGGHVNPAVTFGFFVGGNLTLLRCILFWIAQILGSVIACLLLKFTSGGQRVPVFGLSSGVKVGNALALEMVMTFGLVYAVYATAADPRSRRNSLGTIAPIVIGLIVGANILVAGPFDGGSMNPAAAFGPALVGWNWENHWVYWVGPLVGGGLAGFLYELAFVSSTRQRFRRDYRNYY* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1559 253 PANTHER AQUAPORIN TIP1-1 2 245 - -
Pvu7g1559 253 ProSitePatterns MIP family signature. 80 88 IPR022357 -
Pvu7g1559 253 Pfam Major intrinsic protein 17 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1559 253 SUPERFAMILY Aquaporin-like 15 242 IPR023271 -
Pvu7g1559 253 CDD MIP 21 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1559 253 PANTHER AQUAPORIN-8 2 245 IPR034294 -
Pvu7g1559 253 Gene3D Glycerol uptake facilitator protein. 5 248 IPR023271 -
Pvu7g1559 253 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1559 253 PRINTS Major intrinsic protein family signature 62 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1559 253 PRINTS Major intrinsic protein family signature 99 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1559 253 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1559 253 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu7g1559 253 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1559 Pvu-Chr7 37339423 37341140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1559 1 249 Major Intrinsic Protein MIP AT2G36830 62.055 7.01e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1559 K09873 - gmx:100820403 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1559 7 37339423 37341140 Pvu1g1834 1 44052908 44055413 ECH
Pvu7g1559 7 37339423 37341140 Pvu7g0969 7 9797812 9800701 ECH
Pvu7g1559 7 37339423 37341140 Pvu7g1559 7 37339423 37341140 ECH
Pvu7g1559 7 37339423 37341140 Pvu5g1398 5 36324908 36326497 ECH
Pvu1g1876 1 44550201 44551499 Pvu7g1559 7 37339423 37341140 PCT