Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1553 ATGGCAGGGGAAGAAGAGCTAGCAAAAACCAAGGCCTTCATACGCCATGTTATCACTGGTCGTTGGTTCATGATCTTTGCCTCGTGTCTCATCATGGCAGTTTCAGGGGCAACATACATGTTTGGTTTGTACTCCAACGAGGTCAAAGCCTCTTTGGGCTATGACCAGTCGACGCTAAACTTGATAAGCTTCTTCAAGGACCTTGGTGCCAACCTTGGAATTTTCTCTGGGTTGATCAATGAGATAAGCCCCCCTTGGGTTATACTAGCCATGGGAGCCACTATGAACTTTGTTGGCTACTTCATGATATGGCTCTCTGTCACTTCACGCATTGCCAAACCCCAAGTGTGGCAAATGTGTCTCTACTTTTACATTGGTGCTAATTCTCAGTCTTTTGCTAACACTGGTGCTTTGGTAAATTGTGTCCAAAGCTTCCCAAGAAGCCGTGGAAGTGTTATTGGTCTTCTCAAGGGTTATGTGGGTCTAAGTGGTGCTATTTTCACTCAGCTATACCATGCCTTCTATGGTGAAGACTCCAAGGCTCTTATATTCCTAATTGGGTGGCTTCCTGCTGCTATTTCCTTCATTTTCCTTCCAACAGTTAGGGTGTTGAGTATAACCCCACAACTCAGAGAGATCAAGGTTTTTTACCAACTTCTTTATATTTCACTTGGGGTTGCAGGGTTTCTCATGGTGTTGATAGTTATACAGAACAGGTTGAGTTTCACTAGGGTGGAGTACATAGTGGATGGGATGATGGTTCTTTTCTTGCTTCTTCTCCCACTTGGTATTGTGTTCAAAGAAGAGTTCAAACTTTGGAAGAACCAAAACCAAACCTTCACAGATCATGCAGATGCTGCCTCAGTTATGGAATTGCCACAACCACAAGAAGCACATGCAGCTGCATCTTCTCATTTGGAGGGGAAAACTAATTCTTGTCTAGAGAACGTATTCAAACCTCCAAAAAGGGGCGAGGACTACACCATCTTCCAAGCTATTTTCAGCATCGACATGTTGATTCTGTTCATTGCAACAGTGTTTGGTGTGGGAGGAACATTGACGGCTCTTGACAATTTGGGACAGATTGGAAACTCATTGGGGTACCCCAAAAAGAGCCTCACAACTTTTGTGTCTTTAGTGAGTATATGGAATTATCTAGGAAGAGCATCTTCTGGCTTTGCCTCAGAAATTTTGTTAACCAAATACAAATTCCCTCGTCCCTTGATGCTCACTCTAGTCATGCTTCTGTCCTGTGTTGGCCATATTCTAATCGCTTTTGGTATCCCAAACTCACTTTATTTCTCTTCAGTGATTATTGGGTTTTGCTTTGGGGCCATGTGGCCCTTAATGTTTGCCATCATATCTGAAATATTTGGCCTCAAGTACTACTCTACTTTATACAATTTAGGTGCTGTGGCAAGCCCTGTTGGATCTTACATTCTGAATGTGAGAATCACCGGTTATTTGTATGATAAAGAGGCTTTGAAGCAATTGGGGATGAAGGGACTCACAAGGCAAAATGGGAAGGACTTAACTTGCTTGGGAGTGCAATGCTTTAAGACAGCTTTCATCATAATCACTGCATCAACCTTGGTTGGATGCTTTGTTTCCTTTATTCTAGTGTTAAGGACCAGAAAATTTTACCAAGGTGACATTTATGAAAAGTTCAGAGTTGAACCAGACACACCACAGAATCTTCCAACTTTTGGCACCTCTGCCACCACCTCAAACTTCGCTCAAGAACCAGATAAAATCAATAGGAAATAA 1767 0.4261 MAGEEELAKTKAFIRHVITGRWFMIFASCLIMAVSGATYMFGLYSNEVKASLGYDQSTLNLISFFKDLGANLGIFSGLINEISPPWVILAMGATMNFVGYFMIWLSVTSRIAKPQVWQMCLYFYIGANSQSFANTGALVNCVQSFPRSRGSVIGLLKGYVGLSGAIFTQLYHAFYGEDSKALIFLIGWLPAAISFIFLPTVRVLSITPQLREIKVFYQLLYISLGVAGFLMVLIVIQNRLSFTRVEYIVDGMMVLFLLLLPLGIVFKEEFKLWKNQNQTFTDHADAASVMELPQPQEAHAAASSHLEGKTNSCLENVFKPPKRGEDYTIFQAIFSIDMLILFIATVFGVGGTLTALDNLGQIGNSLGYPKKSLTTFVSLVSIWNYLGRASSGFASEILLTKYKFPRPLMLTLVMLLSCVGHILIAFGIPNSLYFSSVIIGFCFGAMWPLMFAIISEIFGLKYYSTLYNLGAVASPVGSYILNVRITGYLYDKEALKQLGMKGLTRQNGKDLTCLGVQCFKTAFIIITASTLVGCFVSFILVLRTRKFYQGDIYEKFRVEPDTPQNLPTFGTSATTSNFAQEPDKINRK* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1553 588 Gene3D MFS general substrate transporter like domains 328 548 IPR036259 -
Pvu7g1553 588 PANTHER MFS TRANSPORTER 7 565 - -
Pvu7g1553 588 CDD MFS_Mch1p_like 20 534 - -
Pvu7g1553 588 Pfam Nodulin-like 21 265 IPR010658 -
Pvu7g1553 588 SUPERFAMILY MFS general substrate transporter 22 546 IPR036259 -
Pvu7g1553 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1553 Pvu-Chr7 37222709 37225435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1553 11 557 Nodulin-like Gene Family AT2G39210 63.538 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1553 - - gmx:100814000 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1553 7 37222709 37225435 Pvu7g0251 7 1800944 1803088 ECH
Pvu7g1553 7 37222709 37225435 Pvu7g1553 7 37222709 37225435 ECH
Pvu1g1870 1 44498041 44500036 Pvu7g1553 7 37222709 37225435 PCT