Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1545 ATGAAGTCAAGATTTCTTAGAGGGTGCCTCAACAAGTGCAAGAAAATGTGCCTCAACAAGTGCATATCTTGTGAAGAATGTTGTGAACGAGCTTGGTGGTCTTCTTTGCATGAAGGTTGTTCCAATATTCCAAGTGATGTTCCAAAGGGTCACTTGGTTGTCTACGTGGGAGAGAACCACAAGAGATATGTAATCAAGATTGGTTTGCTCCACCATCCACTCTTCAGGGCTTTGTTGGATCAAGCTCAGGAAGAGTATGATTTCATTGCAGATTCAAAACTCTGTATTCCCTGCGATGAACACCTCTTCCTCAGTGTCCTTCGATGTGCTAGCTCCCCACAGAACCAACGAGTGTGTCTGTGTCTCTGA 369 0.4444 MKSRFLRGCLNKCKKMCLNKCISCEECCERAWWSSLHEGCSNIPSDVPKGHLVVYVGENHKRYVIKIGLLHHPLFRALLDQAQEEYDFIADSKLCIPCDEHLFLSVLRCASSPQNQRVCLCL* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1545 122 Pfam Auxin responsive protein 35 109 IPR003676 GO:0009733
Pvu7g1545 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 122 IPR003676 GO:0009733
Pvu7g1545 122 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1545 Pvu-Chr7 36913987 36914355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1545 30 117 Calmodulin-binding Proteins AT4G34750 46.809 8.52e-23 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1545 K14488 - gmx:100812927 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1545 7 36913987 36914355 Pvu7g1545 7 36913987 36914355 ECH
Pvu1g1847 1 44210973 44211350 Pvu7g1545 7 36913987 36914355 PCT