Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1544 ATGAATGAGCGAGGATGCTATTCAACAGAATATGAGATGGATCGTGAAGAATATTTGCGGAAGTGTTCCAATATGAAATGCCAAAGAGTTCAGGTGGATGAATCATATGTACCTGCTCTTCAAGATGAAGTAATGGAAGTTGAGCATTTGCTTGCAGAACCTAGAAACAATCTTGCTTTCCAGGATGGTAGTTTGGATTCTCATACAACTTTGAACGGAAAGGATGATTTGGAACTGGAGGTCCTTGATGGATTGCTAGATGATGTCGAAATCAATGATCTTGAAGGAGCTGACGGTTTCCCTGGTGCATGTGAAGAATATTTTTTGGATTTTGAATTTGCTGACAATATTGAGGAGGTACTAGGTTCTGGTCCTTTTGAAGGTTCACTCTTTCAAAACTCAAGTTCGGAAAGTCATTCTTCAGGATTAAGTAGAAGTAGCATTGTTGGTGGGGTATTAGAATCAACAAAAGTACCTACTGCACAATCTGAATGCAAAAATGATTCTCTAGATGAGACAGTAACCTATGAATCACATGGTGCATTCAGCAACAATCCTAGTCAACCATCAAAAGGAAATTGCAGGTACAACATTTCACTTGATGTGCAACATCTGCAAGAGTTGGATAACTATCGTCATTTAGCTGGTTCTATACTGACTTGTAAGAAGGAAAAGGGTTCTATCGAAAAAGGCCAACCTTCTGCACTTAGAGAGAAAAGATTCCGAAAGCCTACGCAGAGGTATATTGAAGAATTTTCAAATGCGAGCTCAAAGGAAAAGGTACCACCTGCTGGTACAAAAACTAAACATTCCAGTGACTCATCATGTAATGTACTTCATATAAGAATTAAATCATTGAAAAAGAGTCCAAGCGAGAAGTCTAGTAATGAAAATAGTGAGGTAATGCTTCCTGAGTTGCAAGTTCGGAAAGCACGTCAGAAGAAAGAGAAACTTCAGTATGAGTATGAATCATTTCCCTCGGAATCTGAGGATGGATGTTCAATGACAAAAAAATCTAGAAGAAAAGATAGAAGAAAACATCAGAAGATGTGGACTCTCCCTGAAGTTTTGAAGTTGGTTGAAGGCATATCTGAATATGGAGTTGGTCGTTGGACTGATATTAAGAAGTTTTTGTTTTCTTCTTCAAGCTACCGAACTCCCATAGATCTCAGGGACAAGTGGCGAAACCTTTTGAGAGCCAGTTCTGTGCAGAAAAACAAGAAAGAGGCTGAGCAAAATGACGAGTTTGCCCTGCGTCCCTTACCATTTAATGTGGTACATCGTGTGCGAGAATTGGCTAAAATTCACCCATACCCAAGGCAACGTGGGTCAAAGAAGTTGCGTTTTAGCCAAGCTGGCTCTTCTGTCGTTGCAGATTCTCCTCCCGTTAGTCTTAGCAAAAGAAATGTACGTAGAAAGTTTACTTAG 1428 0.3971 MNERGCYSTEYEMDREEYLRKCSNMKCQRVQVDESYVPALQDEVMEVEHLLAEPRNNLAFQDGSLDSHTTLNGKDDLELEVLDGLLDDVEINDLEGADGFPGACEEYFLDFEFADNIEEVLGSGPFEGSLFQNSSSESHSSGLSRSSIVGGVLESTKVPTAQSECKNDSLDETVTYESHGAFSNNPSQPSKGNCRYNISLDVQHLQELDNYRHLAGSILTCKKEKGSIEKGQPSALREKRFRKPTQRYIEEFSNASSKEKVPPAGTKTKHSSDSSCNVLHIRIKSLKKSPSEKSSNENSEVMLPELQVRKARQKKEKLQYEYESFPSESEDGCSMTKKSRRKDRRKHQKMWTLPEVLKLVEGISEYGVGRWTDIKKFLFSSSSYRTPIDLRDKWRNLLRASSVQKNKKEAEQNDEFALRPLPFNVVHRVRELAKIHPYPRQRGSKKLRFSQAGSSVVADSPPVSLSKRNVRRKFT* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1544 475 ProSiteProfiles Myb-like domain profile. 343 398 IPR001005 -
Pvu7g1544 475 MobiDBLite consensus disorder prediction 251 275 - -
Pvu7g1544 475 SUPERFAMILY Homeodomain-like 350 417 IPR009057 -
Pvu7g1544 475 MobiDBLite consensus disorder prediction 327 346 - -
Pvu7g1544 475 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 20 473 - -
Pvu7g1544 475 MobiDBLite consensus disorder prediction 447 462 - -
Pvu7g1544 475 PANTHER TRF-LIKE 8 20 473 - -
Pvu7g1544 475 SMART sant 347 400 IPR001005 -
Pvu7g1544 475 Gene3D - 336 449 - -
Pvu7g1544 475 MobiDBLite consensus disorder prediction 443 463 - -
Pvu7g1544 475 Pfam Myb-like DNA-binding domain 350 398 IPR001005 -
Pvu7g1544 475 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 342 402 IPR017930 -
Pvu7g1544 475 CDD SANT_TRF 349 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1544 Pvu-Chr7 36900309 36909852 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1544 349 398 Single Myb Histone (SMH) Gene Family AT1G15720 50.000 2.94e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu7g1544 Myb_DNA-binding 9.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1544 - - gmx:100810255 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1544 7 36900309 36909852 Pvu7g1544 7 36900309 36909852 ECH