Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1543 ATGAGGAACCATGTTTCTTCCCTCTCTTTCCTTCTGCTGTTGATCCCTTTCTTGCCTCCGGTTCAATGCGCCGATAACACTTTTGCACCATCCTTTTACACCGAAGAAATATACAAGGAGCTTGAAAACCTCGCTATTCTGTTAAACAAGGACATTAAAGCAGGTTTAGGTTTCTGCATCAAGGATGTGCAAAAAGATTGGGAGGAAGCATTTGATTTTAAAGGAAGGTTGGATTTCGTGGATTCTTGTGTTAAGAAAAGAGGAGATTTCAGAGATAGAATATGTACTGTGTCTGAAATAAGGTACTACTTCCATGGTTTCCTGGAACATGGGGCAACATCTACCAATTATGTAAAACCTAACAAGAATTGCAACTTGACCTCGTGGGTTTCTGGTTGTGAACCTGGATGGTGTTGTAGTGCTGACAAAAATTATGACCTGAAAAAGGACATAAAGGACATTCCCTTTAGAACCAGTAACTGTCAGCCTTGTTGTGAGGGGTTTTTCTGCCCTCAAGGATTGACTTGCATGATACCTTGCCCACTAGGTTCTTATTGTCCACTTGCAAAACTGAATAATGATACTGGAATATGTGACCCATATAGTTACCAAATACCTCAGGGAGAAACAAATCATACTTGTGGCAGTGCTGACATTTGGTCTGGCGTGGTGAACAATAGTGATATCTTTTGTTCTCCAGGATCATACTGCCCCACTACAACACGTAAAGTTTCTTGTGATAGTGGATATTATTGCAGGAAGGGTTCTACTCACCAAAATCAATGCTCCAGCTTGAGTTCCTGCAATCCAAACACAGCAAACCAAAATATGCATGCTTATGGCGCTTTACTTATTGTTGCATTGAGCACTCTCCTGATCTTCATTTATAATTGTTCTGATCAAGTTCTAGTTACTCGAGAAAGGAGAAAGGCTAAATCAAGAGAAGCTGCTGCTAGACAGGTAAGAGAAACTGTACAGGCAAGGGAACGGTGGAAAATAGCAAAAGATATTGCTAAGAAAGGTAAGGGGGGATTGCATGAGCAATTAACTCGAACCTTTTCTCGAAAAAAATCAGCGAAATCAGATACATTAAAGGTTGGTACCCAAGCTAAACGTGGTATGGGTGATACGTTTTTGCCCTCAGTGCAAAATTCTTCAAGCTATGAGCAACAATCTGAAGATTCAAACGAGCAAAATAAGGCACCTACCAACCTTACTAAAATGTTGAATTCCCTTGAGGATGACCCAAATAGCAATGAAGGATTCAACCTACAAATTGGAGATAAAAATATTAAAAAGCAGATGCCAAAGGGCAAGAATTTACATACACAAAGCCAAATTTTAAGGTATGCTTATGGTCAAATTGAGAAGGAGAAAGCTCAACAAGAGAAAAACAAGAACTTGACTTTCTCCGGAGTTATTTCAATGGCCACTGAAGGTGAGGTTCGAACAAGGCCTGTGATTGAGGTAGCTTTTAAGGATTTAACTCTCACTTTGAAAGGTAAAAGAAAACATCTACTGAGATGTGTGTATGGTAAACTCATGCCGGGTAGAGTTTCTGCTGTGATGGGTCCCTCAGGAGCTGGCAAAACTACATTTCTTTCTGCATTGGCAGGGAAAGCAAGGGGATGCACTATGACAGGCTCAATTCTAATAAATGGAAAGGCCGAATCCATTCATTGTTATCAGAAAATTATTGGTTTTGTACCACAAGATGATATTGTACATGGGAACTTGACAGTGGAAGAAAATCTTCGTTTCAGTGCAAGATGCAGACTATCTGCGGATATGCCAAAACCAGACAAGGTTCTGATTGTTGAAAGAGTAATCGAATCCTTAGGACTCCAGGCAGTGAGGGATTCCCTTGTTGGGACAATAGAGAAGCGAGGTATATCTGGAGGACAACGAAAACGTGTAAATGTAGGGATGGAAATGGTTATGGAGCCATCATTATTAATCTTAGATGAACCTACAACTGGCTTAGACAGTGCATCTTCCACTTTACTGCTTAAAGCACTTCGTCGTGAAGCACTTGAAGGGGTAAATATCTGCATGGTACTTCATCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATAGTCTTTCTAGCCAAAGGTGGTCTTACTGCATATCATGGTCCTGTTAAGAAAGTAGAAGAATACTTTGCTGGCATTGGAATCAACGTACCGGATAGAGTGAATCCTCCCGACCATTTCATTGACATTTTGGAAGGTTTAGTGAAACCAAATGGTACTGTGACCCATGAACAACTTCCTGTTAGATGGATGTTACATAACAGTTACCCAGTACCACCAGATATGCTTCACTTTGCTGATGAAATTGCTGCCGCCTCAACAAATACCACTGATGCAAGTGCAACAACAAAGGGCACAGATGAAGTTGATGATCAATCTTTTGCTGGAGAGTTTTGGGAGGATATGAAGAGTAATGTTCGGATGCGACGAGATCATATAGAGGCAACCTTCTTAAAGATTAAGGACTTGTCTAATCGAAGAACTCCTGGTGTAGCTCGACAATACAGATACTACCTGGGACGAATTTGTAAGCAGACACTAAGAGAAGGAAAATCACAAGCAGTTGACTACCTCCTTTTATTAGTTGCTGGTGCTATATTAGGAACTCTTACTAAAGTAAATGACGAAACATTTGGGTCCCTCGGATATACCTATACTGTTATTGCTGTCTCTTTACTTTGCAAGATTGCAGCTCTCAGATCATTTTCTCTGGATAAATTACAATATTGGAGGGAGAGTGCATCTGGAATCAGCAATCTGGCACATTTTTTGGCCAAAGATTCAATTGATCTTTTCAATACAGTCATAAAACCTGTAGTTTATCTGTCCATGTTCTATTTTTTTAGCAATCCAAGGTCAAGTTTCGCAAGTAATTATGTCATTTTGCTGTGCCTTGTGTACTGTGTAACTGGCATGGCATATGCAATAGCAATTTATTTTGAGCCTGCTCCAGGACAATTGTGGTCAGTGCTTCTCCCAGTTGTTATGACTCTCATTGCCAACCAGAAAAAAGACACTCTCTTTATGAAGATCCTTGTAAAGTTGTGCTACCCAAATTGGGCTTTGGAGGCATTTATCATTGCAAATGCTGAAAGGTATACTGGAGTTTGGTTGATAACTCGGTGTAGTTCACTAATGAATAGTGGCTATAATGTGAGAGACTGGCCTATTTGTTTGGTTGCCCTCGTTTTGTACGGTATAATTGCTCGAGTTGTGGCTTTCTTCTGTTTAGTGATCACTCAGAAGAAGTGA 3291 0.402 MRNHVSSLSFLLLLIPFLPPVQCADNTFAPSFYTEEIYKELENLAILLNKDIKAGLGFCIKDVQKDWEEAFDFKGRLDFVDSCVKKRGDFRDRICTVSEIRYYFHGFLEHGATSTNYVKPNKNCNLTSWVSGCEPGWCCSADKNYDLKKDIKDIPFRTSNCQPCCEGFFCPQGLTCMIPCPLGSYCPLAKLNNDTGICDPYSYQIPQGETNHTCGSADIWSGVVNNSDIFCSPGSYCPTTTRKVSCDSGYYCRKGSTHQNQCSSLSSCNPNTANQNMHAYGALLIVALSTLLIFIYNCSDQVLVTRERRKAKSREAAARQVRETVQARERWKIAKDIAKKGKGGLHEQLTRTFSRKKSAKSDTLKVGTQAKRGMGDTFLPSVQNSSSYEQQSEDSNEQNKAPTNLTKMLNSLEDDPNSNEGFNLQIGDKNIKKQMPKGKNLHTQSQILRYAYGQIEKEKAQQEKNKNLTFSGVISMATEGEVRTRPVIEVAFKDLTLTLKGKRKHLLRCVYGKLMPGRVSAVMGPSGAGKTTFLSALAGKARGCTMTGSILINGKAESIHCYQKIIGFVPQDDIVHGNLTVEENLRFSARCRLSADMPKPDKVLIVERVIESLGLQAVRDSLVGTIEKRGISGGQRKRVNVGMEMVMEPSLLILDEPTTGLDSASSTLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIVFLAKGGLTAYHGPVKKVEEYFAGIGINVPDRVNPPDHFIDILEGLVKPNGTVTHEQLPVRWMLHNSYPVPPDMLHFADEIAAASTNTTDASATTKGTDEVDDQSFAGEFWEDMKSNVRMRRDHIEATFLKIKDLSNRRTPGVARQYRYYLGRICKQTLREGKSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRSFSLDKLQYWRESASGISNLAHFLAKDSIDLFNTVIKPVVYLSMFYFFSNPRSSFASNYVILLCLVYCVTGMAYAIAIYFEPAPGQLWSVLLPVVMTLIANQKKDTLFMKILVKLCYPNWALEAFIIANAERYTGVWLITRCSSLMNSGYNVRDWPICLVALVLYGIIARVVAFFCLVITQKK* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1543 1096 CDD ABCG_EPDR 488 714 - -
Pvu7g1543 1096 Gene3D - 480 726 IPR027417 -
Pvu7g1543 1096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 490 713 IPR027417 -
Pvu7g1543 1096 SMART AAA_5 516 708 IPR003593 -
Pvu7g1543 1096 MobiDBLite consensus disorder prediction 353 401 - -
Pvu7g1543 1096 Pfam ABC transporter 512 658 IPR003439 GO:0005524
Pvu7g1543 1096 MobiDBLite consensus disorder prediction 378 401 - -
Pvu7g1543 1096 Pfam ABC-2 type transporter 688 1096 IPR043926 GO:0140359
Pvu7g1543 1096 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 27 1092 - -
Pvu7g1543 1096 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 490 731 IPR003439 GO:0005524
Pvu7g1543 1096 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 27 1092 - -
Pvu7g1543 1096 ProSitePatterns ABC transporters family signature. 631 645 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1543 Pvu-Chr7 36876260 36887231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1543 517 710 Calmodulin-binding Proteins AT2G36910 27.723 1.02e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1543 - - gmx:100812387 1955.26