Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1542 ATGAAGTGTTTTCCATTCTACTTTGGAGAGAAGAAGGATGGTGCGAAACGCTTGCAGTCGATATCTGGTCGGTCCAACAGTTCTACTTTTGTTGAGGCTGAGATGAGGAGATCTGGTTCTGAATTGAACTCTATGGATGCCTCAGACACCAGCACAGACTCCTTTAGGAGAAGTGCATTTCCCAGTTTGTCGCAAAGACCCAGCAACCTCAGAGTATTTACTGTTCCCGAACTAAGAACAGCCACAAAGAGTTTTAGTCGCGGTGTGATGCTTGGAGAGGGTGGGTTTGGGTGTGTCTACAAGGGGTTGATCAAGAGTGTAGATGATCCTTCCACAAAAATTGAAGTTGCGGTTAAACAGCTTGGCAGAAGAGGAATTCAGGGGCACAAGGAATGGGTAACAGAAGTGAATGTTCTGGGTATTGTGGAGCATCCGAATCTGGTGAAACTAGTGGGATACTGTGCTGATGATGATGAAAGAGGAATCCAGAGGCTTCTGGTTTATGAATATATGCCCAACAGAAGTGTGGAACATCATTTATCATCACGATCAGAAACTCCTCTCCCATGGAGTAGGAGGTTGAAAATAGCCCAAGATGCGGCTCGAGGCTTAACATACCTGCATGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCAAATATCCTTTTGGACGAGCAGTGGAAGGCAAAGCTGTCAGACTTTGGGCTAGCAAGATTAGGACCATCTGATGGGTTAACTCATGTCTCAACAGCGGTAGTTGGAACAATGGGTTATGCAGCTCCAGAGTATGTTCAAACCGGACGTCTTACATCAAAGAGTGATGTATGGAGCTATGGTGTCTTCCTTTATGAGCTGATTACTGGCCGGCGTCCTATTGACCGAAATCGCCCCAAGGGTGAGCAGAAGATGTTGGAATGGATAAGGCCATACCTTTCAGATGGTAGGAAATTTCAGATAATATTGGATCCAAGACTTGAGAGGAAACACCTCTTCAAGTCGGCACAAAAACTTGCTGTAATAGCCAACAAATGCTTGGTCAGAAACCCAAAGAATCGCCCAAAGATGAGTGAAGTGTTACAAATGGTGACTCAGGTTGTGGAGTCTTCAGTGAGTACTAATCCACAGCCACCCTTGAAGAGTGTTGTAGCCTCAGAAGAAGCTTCTCAGGATACTGAAACAGTGAACAAGAAAATTACCATGGATCAAAAACCAGATTGTAATTGGTTAAGGATGTGGAGGCCAAAACTTTTAAGAACATGTAGATAG 1278 0.4405 MKCFPFYFGEKKDGAKRLQSISGRSNSSTFVEAEMRRSGSELNSMDASDTSTDSFRRSAFPSLSQRPSNLRVFTVPELRTATKSFSRGVMLGEGGFGCVYKGLIKSVDDPSTKIEVAVKQLGRRGIQGHKEWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLVYEYMPNRSVEHHLSSRSETPLPWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEQWKAKLSDFGLARLGPSDGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPIDRNRPKGEQKMLEWIRPYLSDGRKFQIILDPRLERKHLFKSAQKLAVIANKCLVRNPKNRPKMSEVLQMVTQVVESSVSTNPQPPLKSVVASEEASQDTETVNKKITMDQKPDCNWLRMWRPKLLRTCR* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1542 425 Pfam Protein tyrosine and serine/threonine kinase 89 364 IPR001245 GO:0004672|GO:0006468
Pvu7g1542 425 Gene3D Transferase(Phosphotransferase) domain 1 171 387 - -
Pvu7g1542 425 PANTHER OS01G0588500 PROTEIN-RELATED 12 410 - -
Pvu7g1542 425 MobiDBLite consensus disorder prediction 22 52 - -
Pvu7g1542 425 ProSitePatterns Protein kinases ATP-binding region signature. 91 119 IPR017441 GO:0005524
Pvu7g1542 425 PANTHER KINASE 1B 12 410 - -
Pvu7g1542 425 Gene3D Phosphorylase Kinase; domain 1 59 170 - -
Pvu7g1542 425 MobiDBLite consensus disorder prediction 374 397 - -
Pvu7g1542 425 SUPERFAMILY Protein kinase-like (PK-like) 61 366 IPR011009 -
Pvu7g1542 425 ProSiteProfiles Protein kinase domain profile. 85 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1542 425 CDD STKc_IRAK 91 368 - -
Pvu7g1542 425 MobiDBLite consensus disorder prediction 374 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1542 Pvu-Chr7 36870936 36875031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1542 1 396 Glycoside Hydrolase AT3G07070 41.546 1.85e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu7g1542 PK_Tyr_Ser-Thr 5.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1542 - - gmx:100305438 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1849 1 44227856 44233577 Pvu7g1542 7 36870936 36875031 PCT