Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1540 ATGACCTCACATGTTGTCCTACAAAATTTCCCTCACTCCGAAACCAAACTCTCCACAACTACCACCTCCGATTCCCCACCAACTGCGCCGTCACTTGCCGTCACTAAGAGGACCTCAGCCGCCGTCACGCGCTCCACCAAGGACCGCCACACCAAGGTCAACGGCCGCGGCCGCCGCGTCCGAATGCCTCCGCTCTGCGCCGCCCGAATTTTCCAGCTCACGCGCGAGCTCGGCCACCGCTCCGACGGTGAGACCATCGAGTGGCTCCTCCGCCACGCCGAGCCTTCCATCATCGCAGCCACTGGCTCCGGAACCGTCCCCTCTGCTCCCATATCCTCCGTAGCAACCTCCATTCCCTCCTCTGAGTCCTCCGTCTCGGTACCGGTGGTAGGCGGGCAGGGAATGTTCTCCATGGCGCCGCCAAGTTGCCGACTCGACCTGTCCCCGCCGCCGGGGATGGAGTTCGCGGCGTCGAACGGCTATCGGCACATGCCGTTCACGGCACTGCTGTTGCAGCCGGCTACGGTGGAGGATAACCAGAACGACGAGTCTCTCGGCGAACACTGA 567 0.6349 MTSHVVLQNFPHSETKLSTTTTSDSPPTAPSLAVTKRTSAAVTRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGSGTVPSAPISSVATSIPSSESSVSVPVVGGQGMFSMAPPSCRLDLSPPPGMEFAASNGYRHMPFTALLLQPATVEDNQNDESLGEH* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1540 188 Pfam TCP family transcription factor 45 139 IPR017887 -
Pvu7g1540 188 ProSiteProfiles TCP domain profile. 46 100 IPR017887 -
Pvu7g1540 188 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 33 126 IPR005333 GO:0003700
Pvu7g1540 188 MobiDBLite consensus disorder prediction 1 41 - -
Pvu7g1540 188 MobiDBLite consensus disorder prediction 1 58 - -
Pvu7g1540 188 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 33 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1540 Pvu-Chr7 36854790 36855610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1540 46 175 TCP Transcription Factor Family AT2G37000 61.538 4.91e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pvu7g1540 TCP 3.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1540 - - vun:114191143 307.375