Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1530 ATGGTGGAGAAAACTAAGGCAGTTTTTGTGGCTCAACGTACATGGACCTCATGGCTTGGCTATTTTCATCATTTTTTTTTTCCATTTCGTTTTGGCACTGAAATTCAGTTGTGTATATGTGCAACCAGATTTCGAGATGAACTTGAGACAAATAAGTTAATGGACAACAAAGAAAAACACTTGTCATTGGTGGCCTATGATGAGACGAGTGACAAACACAAGGTTGGAAAGGATGGCATAGGCAAGTCTGGTGATGGAAGAGAACTTTCCAGGGTCTTTTCTGAGGATTATGATTCAACAGAGATTTTGATATTGGATCCAAGGGGATCTACAGTAAATACATGGAATAAAATTTTCTTAGCAGCTTGTTTGCTTTCACTGTTTGTGGATCCCCTTTTCTTTTACTTACCAGTGGCTAAGAAAGACAAGTGCATTGATATGTCAACTGGTCTTGAAGTGTTCCTCACCATAATCCGGTCTTTGATAGATGCATTTTACATTATTCAGATTTATTTTCGGTTTCAAACAGCTTATATTGCTCCTTCCTCTCGTGTTTCTGGTAGAGGAGAGCTTATTATAGACTCTTCAAAAATTGCATCAAACTACATGCGAAAAGACTTCTGGCTTGATCTAGTGGCTGCTCAACCACTTCCTCAGGTATTAATTTGGGCCGTAATTCCAAATCTAAAAGGGCCTCAAATGATTGCTTCAAGGCATATTTTGCGCCTTGTTTCCATTTTCCAGTACGTCTTGAGGTTGTATCTTATTTATCCTCTATCATCTGAAATCGTCAAGGCAAATGGGGTAATGATGGAAAAAGCATGGGCTGGGGCAGCATATAATCTGATGCTCTATATGCTGGCTAGTCATGTTTTAGGATCCACTTGGTACCTGTTGTCAATTGAACGCCAGAATGAATGTTGGAAGAAAGCTTGTGCACTGCAGCACCCACACTGCCAGTATCATTATCTTGATTGCCAAAGCATCGCTGACCCAAATAGGATTGCTTGGTTAAGATCAAGCAATCTCTCAAGCCTATGTGATCAGAACAGTGATTTCTTTCAATTTGGCATTTTTACTGATGCTCTAAATTTGGAAGTTACAGCCTCAAAATTCTTCAACAAGTACTATTACTGTCTGTGGTGGGGACTAAGGAATCTAAGCTCTGTGGGACAAAATCTCTTAACAGGCACACGTGTTGCAGAGATCAATTTTGCTGTAATCATTGCAGTTCTTGGATTGGTGCTTTTTGCATTACTCATTGGCAATATGCAAACCTACTTGCAATCCACCACTACGCGGCTAGAAGAATGGAGAATAAGAAGAACAGATACGGAAAGATGGATGCATCACAGGCAACTCCCTCGTTACCTGAAGCAAAATGTGCGACGTCATGAACAATTCAGATGGGTTGCTACTAGGGGAGTTGATGAAGAAACTATTCTCAGAGACCTTCCCACAGATCTAAGACGTGACATCAAACGCCACCTTTGCCTTAATCTCGTTCGACAAGTACCACTGTTTGATCAAATGGATGAGAGGATGCTAGATGCAATATGTGAAAGGCTGAAACCTTCTCTTTTCACTCCAGGGGCTTGTGTGGTTCGCGAGGGTGATCTTGTGAATGAGATGCTTTTCATTGTTAGAGGACGCCTAGATTCTTGCACCACCAATGGTGGCAGAACAGGTTTCTTCAACTCATGCAGACTTGGCTCTGGTGACTTCTGCGGTGAAGAGCTTCTGCCATGGGCTTTGGACCCTCGTCCAACGGTTGTCCTTCCTTCCTCAACTCGCACAGTCAAAGCCATCACTGAAGTGGAAGCCTTTGCACTCATTGCTGAGGACTTGATGTTTGTGGCAGCACAGTTCAGAAGGTTGCACAGCAAACAACTGAGGCATACTTTTAGGTTCCACTCCCATCAGTGGAGGACTTGGGCTGCATGCTTCATACAAGCAGCATGGTTCAGGTATAAGAGAATAAAGGAGACAAGTGAGCTCAAGAGAAAGGAGAACATGATGATGGCCTTTCTTCCTGGAACTGGCACTGAACATTTCTCTGCACCTCTGCAGGCTCCTATGGGCACAATGTATGCTTCAAAACTAGCATTCAGCCCAAGGAAAGGTAGAAGCCTGAGATACGGGCCTGAACTTGACATTCTTGGCTCACTCAGGAAGCCCCTTGAACCAGACTTTACTGATGATGAAGATGATGACAGTTGA 2220 0.4288 MVEKTKAVFVAQRTWTSWLGYFHHFFFPFRFGTEIQLCICATRFRDELETNKLMDNKEKHLSLVAYDETSDKHKVGKDGIGKSGDGRELSRVFSEDYDSTEILILDPRGSTVNTWNKIFLAACLLSLFVDPLFFYLPVAKKDKCIDMSTGLEVFLTIIRSLIDAFYIIQIYFRFQTAYIAPSSRVSGRGELIIDSSKIASNYMRKDFWLDLVAAQPLPQVLIWAVIPNLKGPQMIASRHILRLVSIFQYVLRLYLIYPLSSEIVKANGVMMEKAWAGAAYNLMLYMLASHVLGSTWYLLSIERQNECWKKACALQHPHCQYHYLDCQSIADPNRIAWLRSSNLSSLCDQNSDFFQFGIFTDALNLEVTASKFFNKYYYCLWWGLRNLSSVGQNLLTGTRVAEINFAVIIAVLGLVLFALLIGNMQTYLQSTTTRLEEWRIRRTDTERWMHHRQLPRYLKQNVRRHEQFRWVATRGVDEETILRDLPTDLRRDIKRHLCLNLVRQVPLFDQMDERMLDAICERLKPSLFTPGACVVREGDLVNEMLFIVRGRLDSCTTNGGRTGFFNSCRLGSGDFCGEELLPWALDPRPTVVLPSSTRTVKAITEVEAFALIAEDLMFVAAQFRRLHSKQLRHTFRFHSHQWRTWAACFIQAAWFRYKRIKETSELKRKENMMMAFLPGTGTEHFSAPLQAPMGTMYASKLAFSPRKGRSLRYGPELDILGSLRKPLEPDFTDDEDDDS* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1530 739 Gene3D Helix hairpin bin 433 498 - -
Pvu7g1530 739 Gene3D Jelly Rolls 505 625 IPR014710 -
Pvu7g1530 739 SUPERFAMILY Voltage-gated potassium channels 106 429 - -
Pvu7g1530 739 Gene3D - 119 431 - -
Pvu7g1530 739 PRINTS EAG/ELK/ERG potassium channel family signature 170 179 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu7g1530 739 PRINTS EAG/ELK/ERG potassium channel family signature 287 297 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu7g1530 739 PRINTS EAG/ELK/ERG potassium channel family signature 376 393 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu7g1530 739 PRINTS EAG/ELK/ERG potassium channel family signature 402 413 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu7g1530 739 PRINTS EAG/ELK/ERG potassium channel family signature 420 429 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu7g1530 739 PRINTS EAG/ELK/ERG potassium channel family signature 470 477 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pvu7g1530 739 ProSiteProfiles cAMP/cGMP binding motif profile. 507 592 IPR000595 -
Pvu7g1530 739 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 67 733 - -
Pvu7g1530 739 PANTHER PROTEIN CNGC15A 67 733 - -
Pvu7g1530 739 CDD CAP_ED 507 638 IPR000595 -
Pvu7g1530 739 Pfam Ion transport protein 114 434 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pvu7g1530 739 SMART cnmp_10 507 638 IPR000595 -
Pvu7g1530 739 SUPERFAMILY cAMP-binding domain-like 436 629 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1530 Pvu-Chr7 36647073 36652007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1530 81 734 Ion Channels AT2G28260 64.373 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1530 K05391 - gmx:100815543 1293.49