Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1525 ATGGAGATCACGAGCAGCAATAACAGCTGCAGCAGCATGATGTGGTTTTTCAAAGATAAAGGGTTTGATGAGAACAGTGTGCAAGGAATTTTCCGACGGTGTAGGCGCCTTGAGGATGTGCATCAGGACAGAGCAAGTGAAAATTGGGAGTATTTGAGAAGCATTGGCATTGAAGAAAGAAAGTTGCCCACAATTGTTTCAAAATGCCCCAAGATTCTTGCGCTGGATCTTTATGACAAGATTATGCCCACGGTTGAGTGTCTCAGGACCCTGGGAACAAAACCACGTGAGGTTGCTACTGCCATAGCCAAGTTCCCTCACATACTCTCAAACAGTGTGGAAGAGAAGCTTTGTCCCCTTTTGGCCTTTTTTCAGGCTTTGGGTATCCCTGAAAAGCATATTGGGAAAATGATACTGCTCAACCCTAGGCTTATAAGCTACAGCATTGAAACAAAGTTGACTGAAATTGTGAACTTTCTTGCTAGCCTTGGTCTCAATAAAGATGGAATGATCGGAAAAGTTATAGTTAAGGACCCCTATATTATGGGTTATAGTATTGAGAAAAGACTCGCCTACTTCACAGTTCCTCAA 591 0.4298 MEITSSNNSCSSMMWFFKDKGFDENSVQGIFRRCRRLEDVHQDRASENWEYLRSIGIEERKLPTIVSKCPKILALDLYDKIMPTVECLRTLGTKPREVATAIAKFPHILSNSVEEKLCPLLAFFQALGIPEKHIGKMILLNPRLISYSIETKLTEIVNFLASLGLNKDGMIGKVIVKDPYIMGYSIEKRLAYFTVPQ 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1525 197 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Pvu7g1525 197 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
Pvu7g1525 197 SMART mt_12 28 58 IPR003690 GO:0003690|GO:0006355
Pvu7g1525 197 SMART mt_12 63 94 IPR003690 GO:0003690|GO:0006355
Pvu7g1525 197 Pfam mTERF 6 188 IPR003690 GO:0003690|GO:0006355
Pvu7g1525 197 PANTHER CGI-12 PROTEIN-RELATED 12 191 IPR003690 GO:0003690|GO:0006355
Pvu7g1525 197 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 12 191 - -
Pvu7g1525 197 Gene3D Transcription termination factor 3, mitochondrial 105 193 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu7g1525 mTERF 2.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1525 K15032 - gmx:100816929 341.273