Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1517 ATGTCACAGAATTCTGAGGAGATAAAGACAGTTGAACAGTGGAGATGGTCTGAAATGCAAGGCCTTGAGCTTATGTCCTCTTCTGCTCCTGTTTCTGACTCACATGAATCCAACCCAACATTGGAAGAGAAAAGAGAAGAAAGGGTAATGGAGGAGGCTTCAGTGGCCAAGAAGGATGCTGCTTCTAATGGTACTTTTAGTAGTGGTGGCGGTGGGGATAAGAAGGGTGAGAGCATTTCTTCTGTTCGGTTTGGTGAGCTTTTCAGATTTGCTGATGGATTGGATTACATTTTAATGGCAATTGGAACGGTTGGAGCATTTGTACATGGTTGCTCCTTGCCACTCTTTCTTCGTTTCTTCGCTGATCTTGTGAATTCATTTGGTTCCAATGCGAATAACTTGGACAAGATGACTCAGGAAGTGGTGAAGTATGCGTTTTATTTCCTGGTGGTGGGGGCTGCCATATGGGCATCCTCCTGGGCAGAGATATCGTGCTGGATGTGGACAGGTGAGAGGCAATCAACGAGATTGAGGATCAGGTATCTGGAAGCAGCGTTGGACCAGGACATTCAATTCTTTGATACTGAGGTTCGAACATCCGATGTTGTCTTTGCCATTAACAGTGATGCTGTCATGGTACAGGATGCCATGAGCGAGAAGTTGGGTAATTTCATTCACTACATGGCTACATTTGTTTCTGGATTTGTTGTGGGTTTCACTGCGGTATGGCAATTGGCACTGGTTACCCTCGCTGTGGTCCCTATAATTGCAGTAATCGGAGGCATTCACACCACCACCTTGGCCAAGTTATCTAGTAAAAGCCAGGACTCTCTTTCTCTAGCTGGTAACATTGTGGAACAGACAGTTGTTCAAATTCGAGTGGTTTTGGCTTTTGTTGGGGAGAGTAGAGCATTGCAGGCCTATTCCTCTTCGTTGAGGACTGCACAGAAGATTGGCTACAGGACTGGATTTGCAAAGGGAATGGGATTGGGGGCCACTTACTTTGTTGTTTTCTGTTGCTATGCTCTTTTGCTTTGGTATGGTGGCTATTTGGTTAGGCACCACTACACCAACGGAGGACTTGCCATTGCTACCATGTTTTCTGTTATGATTGGTGGACTGGCTTTAGGACAGTCTGCACCTAGCATGGCTGCATTTACAAAGGCCAGAGTTGCTGCTGCAAAGATTTTTCGTGTGATAGATCACAAGCCGGGTATAGACAGAAAGAGTGAATCAGGTTTGGAGTTAGAGAGTGTTACAGGACTAGTAGAGTTGAGAAATGTCGGTTTTTCATACCCCTCGAGGCCAGAGGTTACCATCCTCAACAATTTTTCATTGAGTGTACCTGCTGGCAAGACCATTGCTCTAGTAGGGAGCAGTGGATCAGGAAAGAGCACAGTTGTGTCCCTCATTGAGAGATTCTATGATCCTTCTTCAGGAGAAGTAATGCTAGATGGGCATGATGTTAAGACATTGAAGCTTAGATGGTTGAGACAACAAATAGGATTAGTGAGCCAGGAGCCTGCTTTGTTTGCTACCACAATTAGAGAAAACATACTCTTGGGTAGGCCTGATGCAGATCAGGTTGAGATTGAAGAAGCTGCCAGAGTGGCCAATGCTCACTCCTTTATCATCAAACTTCCCCAAGGTTATGAAACTCAGGTAGGGGAGAGAGGCCTGCAACTTTCAGGAGGACAAAAGCAGAGAATAGCAATTGCAAGGGCAATGCTGAAAAACCCTGCAATTCTTCTCCTAGATGAGGCCACAAGTGCATTGGACTCAGAGTCAGAAAAGCTGGTTCAGGAGGCCCTTGATCGGTTCATGATTGGCAGAACAACTCTTGTAATTGCTCATCGTCTCTCCACTATTCGCAAAGCTGACCTTGTGGCCGTGCTTCAGCAAGGAAGTGTCACTGAAATTGGAACTCATGATGAGCTCTTTGCTAAAGGTGAAAATGGAGTCTATGCGAAGCTTATTCGGATGCAGGAGATGGCACATGAAACTTCCATGACTAATGCCAGAAAGAGTAGTGCTAGGCCTTCAAGCGCCAGAAACTCTGTAAGCTCACCCATTATAACACGAAATTCTTCTTATGGGCGGTCACCGTACTCACGCAGACTATCTGACTTCTCTACATCTGATTTTAGTCTTTCCCTTGATGCATCACATTCAACTTACAGGCCTGAAAAGCTTGCCTTCAAAGATCAAGCTAGTTCCTTCTGGCGACTTGCAAAAATGAACTCCCCTGAATGGCTATATGCCTTAATTGGTTCTATAGGATCTGTTGTTTGTGGATCCCTTAGTGCATTTTTTGCGTATGTTCTTAGTGCTGTCCTCAGTGTTTATTACAATTCAAACCACAGACACATGATCCGAGAAATTGAAAAGTACTGTTACTTGTTGATTGGGCTATCATCGGCTGCTCTCCTCTTCAACACATTGCAGCACTCCTTCTGGGATATTGTTGGTGAAAATCTTACAAAACGAGTGAGGGAGAAAATGCTTACTGCAGTGCTTAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAAAGTGCTCGGATTGCAGCAAGGCTATCTCTTGATGCCAACAATGTCAGATCAGCCATCGGAGATCGGATTTCAGTAATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGTACTGCAGGGTTTGTATTGCAATGGCGCCTTGCCCTTGTTCTTGTTGCCGTATTTCCGGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTAGAAGCTGCTCATGCCAAGGCCACTCAACTAGCAGGAGAGGCTATAGCCAATGTAAGGACAGTTGCTGCTTTTAATTCGGAAAAGAAAATTGTTGGCCTTTTCACATCCAACCTTGAAACTCCACTTCGGCGCTGCTTTTGGAAGGGACAGATTTCTGGAAGTGGATATGGAATAGCTCAGTTTGCACTCTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCACGGTATATCTGATTTTTCTAAAACAATCCAAGTTTTTATGGTTCTCATGGTCTCAGCTAATGGTGCTGCTGAAACTTTAACCCTGGCTCCTGACTTTATAAAGGGCGGTCGTGCCATGAGATCGGTCTTTGATCTTCTTGACCGAAGAACTGAGATTGAGCCTGATGATCCAGATGCTACACCTGTTCCCGATCACCTTCGCGGTGAAGTAGAACTTAAGCATGTTGACTTCTCTTATCCAACTAGACCAGATATGTCAGTTTTTCGCGACCTCAGCCTTCGTGCCAGGGCAGGTAAAACTCTTGCACTTGTAGGGCCTAGTGGCTGTGGTAAGAGTTCAGTCATTGCACTCATACAAAGATTTTATGATCCAACATCCGGGCGGGTCATGATTGATGGAAAGGACATAAGGAAATACAATCTCAAGTCTCTCAGAAGGCACATTGCTGTGGTGCCTCAGGAGCCATGCCTATTTGCTACTACTATTTATGAGAACATTGCTTATGGACATGACTCAGCTACTGAAGCCGAGATCATAGAGGCTGCAACTCTTGCCAATGCTCACAAGTTCATATCTTCTCTGCCTGATGGATTCAAGACATTTGTTGGTGAGAGGGGAGTTCAACTATCCGGGGGACAAAAGCAAAGAATAGCAATTGCTAGAGCTTTTGTGAGGAAGGCAGAACTTATGCTTCTTGATGAGGCAACAAGTGCACTTGATGTTGAATCTGAGAGGTCTGTTCAGGAGGCCTTAGACCGTGCCTGTGCAGGAAAAACAACTATCATTGTTGCACACAGGCTATCAACTATTAGGAATGCCAATCTGATTGCAGTGATGGATGATGGGAAGGTAGCAGAGCAAGGCTCCCATTCACAGCTGTTAAAGAATCACCCTGATGGGATCTATGCACGCATGATTCAGTTACAAAGGTTCACGAATAACCAAGTCATTGGGATGGCCTCAGGTTCAAGTTCTTCAGCAAGACCAAAAGATGATGAAAAAGAAGGCTAG 4035 0.4498 MSQNSEEIKTVEQWRWSEMQGLELMSSSAPVSDSHESNPTLEEKREERVMEEASVAKKDAASNGTFSSGGGGDKKGESISSVRFGELFRFADGLDYILMAIGTVGAFVHGCSLPLFLRFFADLVNSFGSNANNLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTRLRIRYLEAALDQDIQFFDTEVRTSDVVFAINSDAVMVQDAMSEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPIIAVIGGIHTTTLAKLSSKSQDSLSLAGNIVEQTVVQIRVVLAFVGESRALQAYSSSLRTAQKIGYRTGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFSVMIGGLALGQSAPSMAAFTKARVAAAKIFRVIDHKPGIDRKSESGLELESVTGLVELRNVGFSYPSRPEVTILNNFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPSSGEVMLDGHDVKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPQGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVTEIGTHDELFAKGENGVYAKLIRMQEMAHETSMTNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDASHSTYRPEKLAFKDQASSFWRLAKMNSPEWLYALIGSIGSVVCGSLSAFFAYVLSAVLSVYYNSNHRHMIREIEKYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEKKIVGLFTSNLETPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSKTIQVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRRTEIEPDDPDATPVPDHLRGEVELKHVDFSYPTRPDMSVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISSLPDGFKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATSALDVESERSVQEALDRACAGKTTIIVAHRLSTIRNANLIAVMDDGKVAEQGSHSQLLKNHPDGIYARMIQLQRFTNNQVIGMASGSSSSARPKDDEKEG* 1345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1517 1344 Gene3D - 421 686 IPR027417 -
Pvu7g1517 1344 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 100 388 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu7g1517 1344 CDD ABC_6TM_Pgp_ABCB1_D2_like 744 1060 - -
Pvu7g1517 1344 Gene3D ABC transporter type 1, transmembrane domain 146 1051 IPR036640 GO:0005524|GO:0016021
Pvu7g1517 1344 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 99 1321 - -
Pvu7g1517 1344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1069 1317 IPR027417 -
Pvu7g1517 1344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 662 IPR027417 -
Pvu7g1517 1344 CDD ABC_6TM_Pgp_ABCB1_D1_like 99 396 - -
Pvu7g1517 1344 SUPERFAMILY ABC transporter transmembrane region 87 407 IPR036640 GO:0005524|GO:0016021
Pvu7g1517 1344 MobiDBLite consensus disorder prediction 37 55 - -
Pvu7g1517 1344 SMART AAA_5 1105 1298 IPR003593 -
Pvu7g1517 1344 SMART AAA_5 450 636 IPR003593 -
Pvu7g1517 1344 Gene3D - 1069 1325 IPR027417 -
Pvu7g1517 1344 ProSitePatterns ABC transporters family signature. 1217 1231 IPR017871 GO:0005524
Pvu7g1517 1344 MobiDBLite consensus disorder prediction 24 76 - -
Pvu7g1517 1344 CDD ABC_MTABC3_MDL1_MDL2 1078 1317 - -
Pvu7g1517 1344 CDD ABC_MTABC3_MDL1_MDL2 423 662 - -
Pvu7g1517 1344 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1078 1314 IPR003439 GO:0005524
Pvu7g1517 1344 ProSitePatterns ABC transporters family signature. 562 576 IPR017871 GO:0005524
Pvu7g1517 1344 MobiDBLite consensus disorder prediction 669 688 - -
Pvu7g1517 1344 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 423 659 IPR003439 GO:0005524
Pvu7g1517 1344 SUPERFAMILY ABC transporter transmembrane region 742 1065 IPR036640 GO:0005524|GO:0016021
Pvu7g1517 1344 Pfam ABC transporter 1097 1245 IPR003439 GO:0005524
Pvu7g1517 1344 Pfam ABC transporter 441 590 IPR003439 GO:0005524
Pvu7g1517 1344 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 99 1321 IPR039421 -
Pvu7g1517 1344 Pfam ABC transporter transmembrane region 756 1025 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu7g1517 1344 Pfam ABC transporter transmembrane region 100 372 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu7g1517 1344 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 755 1042 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1517 Pvu-Chr7 36420257 36427243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1517 74 1341 Calmodulin-binding Proteins AT2G36910 88.258 0.0 2299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1517 K05658 - gmx:100777382 2382.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1517 7 36420257 36427243 Pvu7g1517 7 36420257 36427243 ECH