Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1511 ATGAGCGGGGCCAAGGGGAAGAAGAAGGCATCAAGCTTCGTGATCGATTGCGCGAAGCCGGTGGAGGACAAGATTATGGACATTGCTTCTCTCGAGAAGTTTCTTCAAGAGAGGATTAAGGTCGGCGGCAAGGCCGGTGCACTCGGCGATTCCGTTACCGTTGCACGGGAGAAGAGCAAGATCACCGTCACCTCTGACAGCAACTTCTCTAAAAGGTATCTGAAGTATTTGACCAAGAAGTACTTGAAAAAGCACAATGTGAGGGATTGGCTTCGGGTGATTGCATCCAACAAGGACAGGAATGTCTATGAGTTGAGATATTTCAACATTGCTGAGAATGAGGGTGAAGAGGAAGACTGA 360 0.4861 MSGAKGKKKASSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVAREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1511 119 PANTHER 60S RIBOSOMAL PROTEIN L22-2-LIKE 2 119 - -
Pvu7g1511 119 Pfam Ribosomal L22e protein family 8 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
Pvu7g1511 119 PANTHER 60S RIBOSOMAL PROTEIN L22 2 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Pvu7g1511 119 Gene3D - 1 119 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1511 Pvu-Chr7 36333601 36335016 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1511 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 88.793 1.07e-63 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1511 K02891 - pop:7487786 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1511 7 36333601 36335016 Pvu7g1511 7 36333601 36335016 ECH
Pvu7g2034 7 43735363 43736512 Pvu7g1511 7 36333601 36335016 ECH