Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1497 ATGACAGATTTTCAGCCGCTACAGCAGAAACCCGAGCCTGCTGATTCCCATGCTGGGTTTGAGAGGGGAATAGAGGAGTATATGCGTGGGCACTTGGATGAGTGTATGTCGTTTGCTTCATGTAGCTCCTCCCGCGCACCTGATGATGAGGATGACGAGAGCGAACAGCTTGTTCGGAGGAGACGGAGGTCTGACCTTGAAGGAGATGATTTGGCAGAGTCCTCGGCTGCACGCCGGCGGCATTCAAGGATTTTGAGCAGATGGGCTGCACGGCAAGCACAAGAAATGATAACTACTATTGAGAGGAGGAATCGAGAGTCTGAGTTGATGGCACTTGCGGGTTTGCATACAGTGTCGATGTTGGATTCTTCTTTCCTGAGGGGCTCACAGTCTCCAACTTCTGGCCAGGAGGGGGCTGTGGAGAGGCCAAGCACTCAGGCATCTGCCATTTTGCAGATGTGGCGTGAGTTGGAAGATGAACATTTGTTGAACCGGGCACGAGAAAGGATGAGGGTAAGGTTGCGGCAGCAGAGGAATTCGGACTCTAATACCAATGTGTCCAGTACCATGTCTGATAGTCGAGGCAGTGAGAATCATGGGAGTTTGGGGGATGCAAGTGAAAGTGAAAATGATTATGGTACTTGGTCACATGATCAGATTGGCTCGAGGAATGCACACGGGGATCGTAATGGGTCTAGCAGGGAGCAATCTCCTGATCTTGGCGAAGTTGAGAGGGAGAGAGTTAGACAGATTGTTCGGGGGTGGATGGAAAGTGGCATTAGTGATCATTCATCCAATGTGAGTCAGCGAAACAATAACCGGAGAGCAGAATGGCTTGGAGAAACAGAGCGTGAAAGGGTAAGAATAGTCAGGGAATGGGTGCAAATGACTAGCCAGCAGAGAGGTTCGCGGGGGAGCCGTAGGGATTCTCAAGTAAGTGAAGGTGCTCAAGCTGATCCAGTCCGTGATGTAGCTGACAATGATGAGAGTCAGCCAGAGCATGTTCGGCGGGACATGTTGAGGTTCCGTGGAAGACAGGCTCTAGTTGATTTGCTTGTGAGGATAGAAAGGGAAAGACAAAGAGAACTGCAGGGATTGTTGGAGCATCGAGCTGTTTCTGATTTTGCTCATCGCAACCGTATTCAGTCACTGCTTAGAGGTAGATTCCTCCGAAATGAAAGAACTGTTGAAGATGAGAGGCCACCATCTATGGCTGCAAGTGAATTAGTTCAGCTAAGACAACGGCACACAGTCTCTGGTTTAAGGGAGGGGTTTCGTTCAAGATTAGAAAATATTGTTCGTGGTCAAGCAGGCACCAATCCTGATACCACATCAAATAGTAATGCCTCTGAAACAAGAGGGGATGAAACCCAAGCAAACAGTCTGGTAGATGGCCAACAAGAAAATTATGAACAACTGCAGATTAGGAACCTGGAAACTGATCTGCGTCAGTTACCTAATGGAACAGGAACTTTGGAGAGTAGCACAAGTGAGAGTATTAGTTGGCAAGAAACTAATAACCAAGGAGGGAATTGGCAGGAACAAATTGCTGAGGAAGGGGGAGGAAACTGGCAACAGAGTCCATTCAATCAGACGAGAGATGGAAGGGCAGTCAGTGATTGGCCGCAGGAACCTCCCAGAAATTTAGCTGGGGAAGATCCTCATCCAAGGGAATCTCAAAGAATTTGGCACGAGGATAACACAAGGGAAACTGCTGCTAATTGGTCCGAAGGATCTTCTGGAGTTTCGAGGAATCACCGTGGGGTTCCTGTTAGAAGATTCAATAGATTTCATCCACCTGATGATGATAATGTATACAGTATGGAGCTTAGAGAACTTCTGAGCAGGAGAAGTGTTTCTAATCTTCTACGCAGTGGTTTCCGTGAAAGTCTGGACCAACTAATACAGTCATATGTGGAAAGGCAAGGTCGTGCACCAATTGACTGGGATTTGCATCGGAACTTGCCAACATCAACTCCTGCTTCACCTGAACGGGACCCAGACCAGCAGGCTGGCGAACGAGACGAGGGTCAGCGTGAAACAATTAACAGACCTTCACTGGTGTTGCCATCTCCACCAGTGCCTCCGCCACAACCTCTGTGGCACCAGGATTTACATCAAACTGGATGGTCTCGCCATACCATGCATCGTTCTGAAATTGAGTGGGAGATAATGAATGATTTAAGATCAGATATGGCAAGACTTCAGCAAGGCATGAATCACATGCAAAGGATGTTGGAGGCCTGCATGGATATGCAACTGGAGTTGCAGCGCTCTGTCAGACAGGAAGTATCAGCAGCTCTGAACCGTTCAGCGGGTGAAAACGGATTGGGTGCTGAGACATCTGATGATGGGTCTAAGTGGGGGCATGTGAAAAAAGGAACTTGCTGTGTTTGTTGTGATAACCATATCGATTCTCTTTTGTACAGATGTGGGCACATGTGCACTTGTTCAAAATGTGCCAATGAGTTAATTCGTGGTGGTGGTAAGTGTCCTTTATGCCGAGCACCAATTGTTGAGGTGGTCCGAGCATATTCCATACTGTAA 2547 0.481 MTDFQPLQQKPEPADSHAGFERGIEEYMRGHLDECMSFASCSSSRAPDDEDDESEQLVRRRRRSDLEGDDLAESSAARRRHSRILSRWAARQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQSPTSGQEGAVERPSTQASAILQMWRELEDEHLLNRARERMRVRLRQQRNSDSNTNVSSTMSDSRGSENHGSLGDASESENDYGTWSHDQIGSRNAHGDRNGSSREQSPDLGEVERERVRQIVRGWMESGISDHSSNVSQRNNNRRAEWLGETERERVRIVREWVQMTSQQRGSRGSRRDSQVSEGAQADPVRDVADNDESQPEHVRRDMLRFRGRQALVDLLVRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTVEDERPPSMAASELVQLRQRHTVSGLREGFRSRLENIVRGQAGTNPDTTSNSNASETRGDETQANSLVDGQQENYEQLQIRNLETDLRQLPNGTGTLESSTSESISWQETNNQGGNWQEQIAEEGGGNWQQSPFNQTRDGRAVSDWPQEPPRNLAGEDPHPRESQRIWHEDNTRETAANWSEGSSGVSRNHRGVPVRRFNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGRAPIDWDLHRNLPTSTPASPERDPDQQAGERDEGQRETINRPSLVLPSPPVPPPQPLWHQDLHQTGWSRHTMHRSEIEWEIMNDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGENGLGAETSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCANELIRGGGKCPLCRAPIVEVVRAYSIL* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1497 848 MobiDBLite consensus disorder prediction 52 78 - -
Pvu7g1497 848 SUPERFAMILY RING/U-box 795 841 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 40 78 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 484 509 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 296 313 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 521 537 - -
Pvu7g1497 848 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 780 846 IPR013083 -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 296 333 - -
Pvu7g1497 848 ProSiteProfiles Zinc finger RING-type profile. 796 835 IPR001841 -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 431 466 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 521 587 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 667 681 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 222 244 - -
Pvu7g1497 848 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 1 848 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 1 25 - -
Pvu7g1497 848 Coils Coil 725 745 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 173 244 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 177 221 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 649 695 - -
Pvu7g1497 848 CDD mRING-HC-C3HC5_NEU1 795 835 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 433 466 - -
Pvu7g1497 848 Pfam Zinc finger, C3HC4 type (RING finger) 793 840 - -
Pvu7g1497 848 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 848 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 550 571 - -
Pvu7g1497 848 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1497 Pvu-Chr7 36070974 36077460 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1497 796 842 C3H Transcription Factor Family AT3G06140 42.553 1.58e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1497 - - gmx:100805607 1515.75