Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1490 ATGGGTGATATTGAAGAGAACGATGCTCTTCCGAAGAACAAACCTTCCACTGAAAAGGATGTTTCTGACGAGCTTGAGTTGAGAATGAAGAAGTATCTCAGAGGAGAAAGTGCTAATTTGGAGGTTTTGAAGGATAAAAAGCTGAAGGGTCAACTAGCTGCTAAGGAACAGTTATATGGAAAATCCGCACAAGCTGCTGCTAAGGCCGAGAAGTGGCTTATGCCTAGTGAAGGAGGTTATCTGGAGGCTGAAGGCTTGGAAAAGACATGGAGGATCAAACAGGAGACAATAGCTCATGAAGTAGATATCTCAGGCTCACGGAAACAGTATGATATTATTTTACCAGAACTTGGTCCATACACTCTGGATTTTACTTCAAGTGGCCGGTATATGGCTGTGGGTGGTCGTAAGGGCCATATAGGAATAGTGGACATGATAAATCTGAGCCTAATTAGAGAGCTTCAGGTAAGGGAAACAGTACGTGATGTGGTATTCTTGCACAATGAGCTCTTTTTTGCTGCTGCACAGAAAAGGTATCCATACATCTACAATCGAGAAGGCACAGAGCTTCACTGCCTTAAGGAACATGGTCCAGTGTTAAGGCTTCAGTTTCTGAAAAACCATTTTCTCTTGGCTACAATCAATAAGTTTGGGCAACTTCGCTATCAGGATGTTACAATGGGTTCAATGGTTGGTAATTTTCGAACTGGCGTAGGACGTACAAATGTGATGCAAGTAAACCCCTTCAATGGGGTTGTTTCTTTAGGTCACTCAGCTGGAACTGTTACCATGTGGAAGCCGACCAGTTCTGCTCCTCTTGTCAAGATGCTATGTCATCACGGGCCTGTCTCAGCGCTGGCATTTCACTCAAATGGCCACTTGATGGCCACTGCAGGGAAAGATAAAAAAGTTAAGCTTTGGGACTTAAGGAAATATGAGGTTCTTCAAACCTTACCTGGTCATGCAAATACTCTGGATTTTAGTCAAAAGGGCTTACTTTCTTGCGGTAATGGTTCATTGATCCAGGTTCTGCGAGATGTTTCTGGTACACAGAATTATTCCAGGTACATGACTCATTCCATGGTTAAAGGTTACCAGGTAGAAAAATTAGTATTTCGACCATATGAAGATGTTTTAGGTATAGGGCATTCCATGGGTTGGTCTAGTATTCTTATTCCAGGAGCTGGAGAACCCAACTTTGACTCATGGGTTGCAAACCCGTTCGAAACTTCCAAACAGAGGAGAGAAAAGGAAATACGGACTCTACTTGATAAGCTCCCACCTGAGACTATCATGTTGGATCCCAGCAAGATTGGTACGGTGAAACCAAAAGGAAAGAGGCCAACAAAGAAAGAGAAGGAGGCTGAGATAGAAGCTGCCGTTGAAGCTACTAAGGGCAAGAAACTGAAGAAGAAGACAAAAGGTAGAAACAAGCCAGGTAAAATGATACAGAAAAAGCAAGACGCCATTGCTAGAGTGAAGAGGCCCTACATGGAGCAGAAAATTCAAGAAGAGGAAAACGTGTCAAGAAAGAAGCAGAAAACTAGTGTTGAACTACCAAAATCTTTACAACGGTTTGCTCGTAAAAAGGCATCGTCGTGA 1602 0.4295 MGDIEENDALPKNKPSTEKDVSDELELRMKKYLRGESANLEVLKDKKLKGQLAAKEQLYGKSAQAAAKAEKWLMPSEGGYLEAEGLEKTWRIKQETIAHEVDISGSRKQYDIILPELGPYTLDFTSSGRYMAVGGRKGHIGIVDMINLSLIRELQVRETVRDVVFLHNELFFAAAQKRYPYIYNREGTELHCLKEHGPVLRLQFLKNHFLLATINKFGQLRYQDVTMGSMVGNFRTGVGRTNVMQVNPFNGVVSLGHSAGTVTMWKPTSSAPLVKMLCHHGPVSALAFHSNGHLMATAGKDKKVKLWDLRKYEVLQTLPGHANTLDFSQKGLLSCGNGSLIQVLRDVSGTQNYSRYMTHSMVKGYQVEKLVFRPYEDVLGIGHSMGWSSILIPGAGEPNFDSWVANPFETSKQRREKEIRTLLDKLPPETIMLDPSKIGTVKPKGKRPTKKEKEAEIEAAVEATKGKKLKKKTKGRNKPGKMIQKKQDAIARVKRPYMEQKIQEEENVSRKKQKTSVELPKSLQRFARKKASS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1490 533 PANTHER WD-REPEAT PROTEIN BING4 11 529 IPR040315 -
Pvu7g1490 533 ProSiteProfiles Trp-Asp (WD) repeats profile. 276 317 IPR001680 GO:0005515
Pvu7g1490 533 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 276 310 - -
Pvu7g1490 533 SUPERFAMILY WD40 repeat-like 115 383 IPR036322 GO:0005515
Pvu7g1490 533 MobiDBLite consensus disorder prediction 1 23 - -
Pvu7g1490 533 Gene3D - 119 384 IPR015943 GO:0005515
Pvu7g1490 533 SMART BING4CT_2 355 435 IPR012952 -
Pvu7g1490 533 SMART WD40_4 227 266 IPR001680 GO:0005515
Pvu7g1490 533 SMART WD40_4 311 345 IPR001680 GO:0005515
Pvu7g1490 533 SMART WD40_4 106 144 IPR001680 GO:0005515
Pvu7g1490 533 SMART WD40_4 269 308 IPR001680 GO:0005515
Pvu7g1490 533 SMART WD40_4 147 184 IPR001680 GO:0005515
Pvu7g1490 533 MobiDBLite consensus disorder prediction 465 533 - -
Pvu7g1490 533 PANTHER BNAANNG36350D PROTEIN 11 529 - -
Pvu7g1490 533 Pfam WD domain, G-beta repeat 277 308 IPR001680 GO:0005515
Pvu7g1490 533 Pfam BING4CT (NUC141) domain 356 434 IPR012952 -
Pvu7g1490 533 ProSitePatterns Trp-Asp (WD) repeats signature. 295 309 IPR019775 -
Pvu7g1490 533 MobiDBLite consensus disorder prediction 481 518 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1490 118 331 U-box Gene Family AT2G33340 24.779 4.93e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1490 K14768 - gmx:100786818 950.273