Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1488 ATGCTGGAAATGGAGAAGGATTTTGATTCCAAGCTAAAGGTTCAGGGGAATTCCTCATCTTCCAATGGTGGAGGCAATGTCCCGAGATCCAAGAGCTTTGCTTTTAGGGCTCCTCAGGAGAATTACACTATTCAGGACTTTGAATTGGGCAAGATCTATGGTGTTGGCTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACAGGAACTGTGTATGCATTGAAGATCATGGATAAAAAGTTTATTACTAAAGAGAACAAAACAGCTTATGTGAAATTGGAACGCATCGTGCTGGATCAATTGGATCATCCAGGCATTGTGCGGCTATATTTCACATTTCAAGACTCATTTTCTCTATACATGGCCCTTGAATCCTGCGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGTCGTCTAACTGAGGACGAGGCACAGTTCTATGCAGCTGAAGTTGTTGATGCTCTTGAATACATACATAATTTGGGAGTCATACACCGTGATATTAAGCCAGAGAACTTGTTACTTACAGCTGAAGGACATATTAAAATAGCCGATTTTGGGAGTGTGAAGCCTATGCAGGATAGTCAAATCACTGTCCTTCCGAATGCAGCATCTGACGACAAAGCCTGCACTTTTGTGGGAACAGCTGCTTATGTTCCTCCAGAGGTTCTTAATTCCTCTCCGGCAACTTTTGGAAATGACCTATGGGCACTTGGCTGCACATTATACCAAATGCTTTCTGGAACTTCCCCTTTTAAAGATGCAAGTGAATGGCTAATTTTTCAAAGAATTGTAGCAAGAGAACTTAGATTTCCAGATTACTTTTCTGACGAAGCAAGAGACCTCATTGACCGTCTGTTGGATTTGGATCCCAGCAGGAGACCAGGTGCTGGACCTGATGGTTATGTTATTCTGAAAGCACACCCATTTTTCAAGGGGGTTGACTGGGATAACTTGAGGGCACAAATTCCTCCAAAACTTGCTCTGGAACCTGGGACTCAGTCACCTGCAGCTGATGATGTTCATGATTCATCATGGAGTCCTTCTCACATTGGGGATGGTTCTTTGGCTTCGGTTAGACAATCTGATGCTGCTACATCTTCTGATGGGACTGGTCACATAACTAGGCTAGCTTCAATTGATTCCTTTGATTCAAAATGGCAACAGTTTTTGGATCCTGGGGAATCTGTTCTTATGATATCTATGGTGAAGAAATTACAAAAACTAACAAGCAAGAAGGTGCAGCTCATCCTCACCAACAAACCAAAGTTGATCTATGTGGACCCATCAAAGCTAATTGTGAAGGGAAATATAATATGGTCCGATAATCCAAATGATTTAAGTATCCAAGTGACTACGGCATCAAATTTCAAGATTTGCACACCTAAAAAGGTAATGTCGTTTGAAGATGCTAAGCAAAGAGCATGGCAGTGGAAAAAGGCAATTGAAGGACTTCAAAACCGGTGA 1476 0.4194 MLEMEKDFDSKLKVQGNSSSSNGGGNVPRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLYFTFQDSFSLYMALESCEGGELFDQITRKGRLTEDEAQFYAAEVVDALEYIHNLGVIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSQITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIVARELRFPDYFSDEARDLIDRLLDLDPSRRPGAGPDGYVILKAHPFFKGVDWDNLRAQIPPKLALEPGTQSPAADDVHDSSWSPSHIGDGSLASVRQSDAATSSDGTGHITRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPNDLSIQVTTASNFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNR* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1488 491 Pfam Protein kinase domain 49 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1488 491 ProSiteProfiles Protein kinase domain profile. 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1488 491 MobiDBLite consensus disorder prediction 1 30 - -
Pvu7g1488 491 Gene3D Transferase(Phosphotransferase) domain 1 131 329 - -
Pvu7g1488 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pvu7g1488 491 MobiDBLite consensus disorder prediction 331 352 - -
Pvu7g1488 491 Gene3D Phosphorylase Kinase; domain 1 45 130 - -
Pvu7g1488 491 MobiDBLite consensus disorder prediction 13 28 - -
Pvu7g1488 491 Pfam PH domain 388 490 IPR033931 -
Pvu7g1488 491 SMART serkin_6 47 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1488 491 Coils Coil 471 491 - -
Pvu7g1488 491 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 24 487 - -
Pvu7g1488 491 SUPERFAMILY PH domain-like 308 490 - -
Pvu7g1488 491 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 487 - -
Pvu7g1488 491 SUPERFAMILY Protein kinase-like (PK-like) 44 353 IPR011009 -
Pvu7g1488 491 CDD STKc_PDK1 45 314 IPR039046 GO:0004674
Pvu7g1488 491 Gene3D - 363 491 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1488 Pvu-Chr7 35838945 35849430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1488 1 491 AGC Kinase Gene Family AT3G10540 81.301 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Pvu7g1488 Pkinase 5.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1488 K06276 - gmx:100788780 931.013