Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1471 ATGGCAGCGTCGCAATCAGAGAAGAAAGTGGTGGTGATAGGAATAGACGACAGAGAAGCGAGCACGTACGCCATCAGGTGGACCCTTGATCACTTCTTTCCGAGCCCAATCTTCAAGCTGGTTCTCGTCCATTCCAGGCCCGCCGCCTCCTCCGCTGTGGGCTTCACTGGGCCTAGTGCCGGTGAAATATTTTCTATTCTGGATTCAGATTTGCAAAAGACTGCCACAAAAGTCATCGATTCCGCCAAACAACTTTGCATTGAAAAATCCGTACATGATGCCGCACTGGAAGTAGTGGAAGGTGATCCAAGAAATGTTCTTTGTATGGCTGTGGAAAAATACCATGCAGCAATATTGGTTGTCGGTAGTCATGGTCGTGGGGCTTTAAAAAGGGTGGTTTTAGGTAGTGTAAGTGACTTTTGTGCTCATCATGCTAATTGCACTGTGATGATCGTGAAGAAGCCAAAAATCAAACCCTGA 480 0.4708 MAASQSEKKVVVIGIDDREASTYAIRWTLDHFFPSPIFKLVLVHSRPAASSAVGFTGPSAGEIFSILDSDLQKTATKVIDSAKQLCIEKSVHDAALEVVEGDPRNVLCMAVEKYHAAILVVGSHGRGALKRVVLGSVSDFCAHHANCTVMIVKKPKIKP* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1471 159 CDD USP_Like 11 152 - -
Pvu7g1471 159 PANTHER - 6 158 - -
Pvu7g1471 159 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 155 - -
Pvu7g1471 159 Gene3D HUPs 2 158 IPR014729 -
Pvu7g1471 159 Pfam Universal stress protein family 9 153 IPR006016 -
Pvu7g1471 159 PRINTS Universal stress protein signature 8 26 IPR006015 -
Pvu7g1471 159 PRINTS Universal stress protein signature 113 125 IPR006015 -
Pvu7g1471 159 PRINTS Universal stress protein signature 131 153 IPR006015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1471 Pvu-Chr7 35414265 35415679 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1471 20 154 Plant U-box Gene Family AT5G57035 28.947 6.96e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1471 - - pvu:PHAVU_011G106200g 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1471 7 35414265 35415679 Pvu7g1471 7 35414265 35415679 ECH
Pvu7g1471 7 35414265 35415679 Pvu1g2142 1 47101397 47103523 PCT