Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1447 ATGTCAGGAGAGGAAATCTTGTCATCCAACGAAGAAGAATATGATATATCTCAGCCTCCATTTGGTAACAGAAATGGCTACAATTCAAGAATAGGAATCTATCACTCTCTAGTTAAGCTTGACACTAAGCATGAAATCCCAACAAAGCCTGACCTTAACACTGCCCATTTTGTGCTGTCACAATTCCCACAAGCACATCTTGCTGAGGCAAAAACTGCATTCATTGATGCAAAAACTAATCTGAGTGTTAGCTATGGTGAGCTAAGAAGGTCTACCTACTCCCTTGCATCAGCTTTGTTCCATGGACTTGGGGTTAGGAAAGGTGATGTGGTATTTTTATTGTCACCAAACTCAACCTTGTACTCAGCCATATGCCTAGCTGTGTTAGCAGTTGGAGCAATTCTGAGCCCTGCCAACCCCATCAACACTGCATCAGAAATTGCGAAACAAGTGAGTGATTCAGGTGCTAAACTAGCCATCTCAGCACCAGACGAGCTACACAAATTGGTCCGAACTGGGGTTCCTACAATTCTTACTTCTCGTTCTTCTGATGGCAGCATGTTATCAGTTGAAGAGTTAATAGAAGGCTGTTATAATTCAACAGAGTTGCCGCAAGTTCCTGTGGCACAGTCAGAGACTGCTGCTATACTTTACTCTTCAGGGACCACAGGAATAAGCAAAGGCGTGGTCTTAACTCATGCAAATCTCATTTCCATAACGAGATTAGTTTTGTGGTCTGCTGAGGTCAGTGGATCCCAAGATGATATTTTCTTGGCCTTCATTCCAATGTTTCACATCTATGGACTTGTATTCTTTGGATTAGGATTGTTATGTGTGGGTATAACAACAGTTTTGATGCGGAAGTTTGATTTCCAAGATATGCTTGATGCAATCCAGAAGCACAAGGTTAACAACATACCAGCTGTGCCACCAGTGATCCTTGCGCTAGTAAAGCATTCGAGGGAAGCTAGGTGTGACTTGTCCAGCCTAAGAAGGGTGGGGACAGGTGCTGCACCTTTGAGCAAGGAAGTGGCACAGAAGTTCAGGAAGATGTTTCCATGGATTGAACTAAGGCAAGGTTATGGACTAACAGAAAGTAGTGGTGGATCAACATTTTTTGCCTCAGACAAAGATGCTAAAGCTCATCCAGATTCGTGTGGGAAGCTGATTCCAACATTTTTTGCAAAAGTTATAGACACTGAAACGGGGAAGCCTTTGCCGCCTCGCAAAGAAGGAGAGTTGTGGTTAAAAAGTCCTACTATTATGAAAGGATATCTTGGAAATTTGGAGGCAACAAGTGCAACAATTGATTCAGAAGGTTGGTTGAGGACTGGTGATCTTGGTTACATTGATGATAATGGATTTGTTTACATAGTTGAACGGATAAAAGAGCTAATCAAGCACAATGGGTATCAGGTAGCTCCTGCAGAACTGGAGTCTGTGCTGCTGAGTCACCCTCTTATAGCTGATGCAGCAGTTATACCGTTGGAAGATGAAGAAACTGGACAGATACCAATGGCATATGTGGTGAGAGCAGCTGGTTCTCAACTCTCAGAAGACCAAATCATTCAATTTGTTGCAGGCCAGGTGGCTCCATATAAGAAAGTAAGAAGGGTGAGTTTCATTGACACTATTCCAAAGTCAGCTGCTGGCAAGATATTGCGTAAGGATCTTGTTTCACAAAGCAAATTTCAACCTGTCTCCAAGCTATGA 1713 0.4285 MSGEEILSSNEEEYDISQPPFGNRNGYNSRIGIYHSLVKLDTKHEIPTKPDLNTAHFVLSQFPQAHLAEAKTAFIDAKTNLSVSYGELRRSTYSLASALFHGLGVRKGDVVFLLSPNSTLYSAICLAVLAVGAILSPANPINTASEIAKQVSDSGAKLAISAPDELHKLVRTGVPTILTSRSSDGSMLSVEELIEGCYNSTELPQVPVAQSETAAILYSSGTTGISKGVVLTHANLISITRLVLWSAEVSGSQDDIFLAFIPMFHIYGLVFFGLGLLCVGITTVLMRKFDFQDMLDAIQKHKVNNIPAVPPVILALVKHSREARCDLSSLRRVGTGAAPLSKEVAQKFRKMFPWIELRQGYGLTESSGGSTFFASDKDAKAHPDSCGKLIPTFFAKVIDTETGKPLPPRKEGELWLKSPTIMKGYLGNLEATSATIDSEGWLRTGDLGYIDDNGFVYIVERIKELIKHNGYQVAPAELESVLLSHPLIADAAVIPLEDEETGQIPMAYVVRAAGSQLSEDQIIQFVAGQVAPYKKVRRVSFIDTIPKSAAGKILRKDLVSQSKFQPVSKL* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1447 570 Pfam AMP-binding enzyme 69 467 IPR000873 -
Pvu7g1447 570 CDD 4CL 46 558 - -
Pvu7g1447 570 Gene3D - 464 565 IPR045851 -
Pvu7g1447 570 MobiDBLite consensus disorder prediction 1 21 - -
Pvu7g1447 570 SUPERFAMILY Acetyl-CoA synthetase-like 52 561 - -
Pvu7g1447 570 Gene3D - 41 463 IPR042099 -
Pvu7g1447 570 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Pvu7g1447 570 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 569 - -
Pvu7g1447 570 Pfam AMP-binding enzyme C-terminal domain 477 552 IPR025110 -
Pvu7g1447 570 PANTHER AMP-DEPENDENT SYNTHETASE AND LIGASE FAMILY PROTEIN-RELATED 19 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1447 Pvu-Chr7 34710479 34712666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1447 59 559 Monolignol Biosynthesis Gene Families AT1G20500 44.227 7.19e-153 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1447 K10526 - gmx:100783104 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1447 7 34710479 34712666 Pvu7g1447 7 34710479 34712666 ECH