Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1443 ATGGGTCGCGAAACTGTGTTCCTTCCAGCCCCACCAACCACTGCCACCACTGCAGTGAATCCAGTAGCAGCACCAGCTACACCACCTACTTCTCTTGCTCCTGGTTTCAGGTTCCACCCAACTGACGAGGAGCTTGTAATCTATTACCTGAAGCGCAAGGTTTCTGGCAAAAGCTTCCGATTTGATGCTATATCTGAAGTGGATATATACAGGAGCGAGCCCTGGGACCTAGCAGATAAGTCGAGGTTGAAGACCAGGGACCAGGAGTGGTATTTTTTTAGTGCATTGGACAAGAAATATGGAAATGGTGGGAGGATGAACAGGGCTACCAACAAAGGGTATTGGAAAGCCACTGGGAATGATCGACCAGTGAAACATGATCAAAGGACTGTGGGATTGAAGAAAACTTTGGTGTTTCACAGTGGCCGAGCTCCTGTTGGAAAGAGGACTAATTGGGTTATGCATGAGTACAGACTTGTTGATGAGGAGCTAGAGAGGGCTGGGACTGGATCCTCTCAGCCTCAGGATGCCTATGTCTTGTGTAGAGTATTTCACAAAAATAACATAGGACCTCCAAATGGACAACGATATGCACCCTTTGTTGAAGAAGAGTGGAATGATGAATCTGGAATGATTCCAGGGGCAGAGCCTGTGTATAATGGCTCTGTTGCCTACCAACCACTTGTTGAAGGCAACGGTGGTGTTTTATGCACTGAAGGGAGAAATGGTGTTGTACAG 738 0.4743 MGRETVFLPAPPTTATTAVNPVAAPATPPTSLAPGFRFHPTDEELVIYYLKRKVSGKSFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATNKGYWKATGNDRPVKHDQRTVGLKKTLVFHSGRAPVGKRTNWVMHEYRLVDEELERAGTGSSQPQDAYVLCRVFHKNNIGPPNGQRYAPFVEEEWNDESGMIPGAEPVYNGSVAYQPLVEGNGGVLCTEGRNGVVQ 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1443 246 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 24 236 - -
Pvu7g1443 246 SUPERFAMILY NAC domain 26 187 IPR036093 GO:0003677|GO:0006355
Pvu7g1443 246 ProSiteProfiles NAC domain profile. 32 186 IPR003441 GO:0003677|GO:0006355
Pvu7g1443 246 PANTHER NAC DOMAIN-CONTAINING PROTEIN 78-LIKE 24 236 - -
Pvu7g1443 246 Pfam No apical meristem (NAM) protein 34 159 IPR003441 GO:0003677|GO:0006355
Pvu7g1443 246 Gene3D NAC domain 41 189 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1443 Pvu-Chr7 34591710 34593254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1443 1 234 NAC Transcription Factor Family AT3G10480 59.328 1.04e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu7g1443 NAM 1.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1443 - - gmx:100808783 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1443 7 34591710 34593254 Pvu7g1443 7 34591710 34593254 ECH