Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1413 ATGAATAGTTCAGAGGAGTCTGTGTTATTGCTTGTGAGCTTTATTATTCTGACCCTAGTCGTCACACTTGCTGCTTATTTGTGCTCTAGTGATATTCCACGCACTGTTCCTTCTGTTCCTGTTGCTGTGACACATTCCAACCACACCACAATCACTGTGGAGGCACCTGAGCCATGCATAGATCAGAGTGTCTGCAGGTTTCCAAGTCTCCAATTTTCGAAAGCCAAATTGTGTAGTAGCACTAGCAGTAGCTCTTCAAGCTGTTCCATATGCTTGATGGATTACAAAGAGTGTGATTCCTTGAGAGTGCTGCCTGCCTGTGGTCACTTCTTCCATGTCAAGTGTGTTGATCCTTGGTTGAGAATCAATTTGACCTGTCCAGTTTGTAGGACCCCAATAACCCTCTCAGATGTAAGCAAAGCTTTGTAA 429 0.4429 MNSSEESVLLLVSFIILTLVVTLAAYLCSSDIPRTVPSVPVAVTHSNHTTITVEAPEPCIDQSVCRFPSLQFSKAKLCSSTSSSSSSCSICLMDYKECDSLRVLPACGHFFHVKCVDPWLRINLTCPVCRTPITLSDVSKAL* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1413 142 SMART ring_2 88 129 IPR001841 -
Pvu7g1413 142 Pfam Ring finger domain 87 130 IPR001841 -
Pvu7g1413 142 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 138 IPR013083 -
Pvu7g1413 142 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 141 - -
Pvu7g1413 142 SUPERFAMILY RING/U-box 83 135 - -
Pvu7g1413 142 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Pvu7g1413 142 PANTHER RING-H2 FINGER PROTEIN ATL67 7 141 IPR044289 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1413 Pvu-Chr7 33751619 33752047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1413 61 131 C3H Transcription Factor Family AT5G06490 52.703 3.77e-22 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1413 - - vra:106770594 253.062