Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1390 ATGAAGGGTACATTTCTAAAGAAGGAAATCTTCACTCAAAAGAAATTTCCAACTTGTTTGCAAGAAATGGCAACAGGATCAAAGTTTTTGGACACTGCAATAATGGTAGGAGGTTCTCACTCTCTCACTGCCTATCTTCATGTGTTAAGAAGTGGGGCAACCTCATCAATAACATCATCTCAACAACTTCTTTCATGTTCAAATTCTACCTCAATGAAAGAAGAGGCACCTTTAGCCACATGGATTAGTCATATCCCTGCAAAGTTCAATGGCCCTCAAGACATAAAAAATGTCATAGAGAAAAACCAATCCAATTCTATCTTCCCAGCCTCAGATACAAAAAACAGCTCCATTCCTCTAAATCTTTTGGAAACTCTCCCACCATTAACTATGGCACCATGCTTTGATGAGCCAGTTGCTTCTTCAGCCTCTTCTTCTGCCCCACCCAATTTTCCAAACTTGACTTTGGTTTTGCAGGAACCCTCCATGGTGTACTCATCAAATATGAAAGGTGGTGAAGTCATGTCTGTAACTTCAGATCCCACCTATCAAGTGCCTCACTTTGGGCAAAACCAGCATCAAGCAGGTAGTGATGCATACAAAATGGACAAGATCAACCTAACAAATTCTCGGTCCAAGTCTTTCAATGAGAATTGGTTGAGTACCACCAGGACTCAGCCTATGAAGTATGGTGGAAGAGGCAAGCTGTTTAAAGGGGTGAGGCAGAGACACTGGGGGAAATGGGTGGCAGAGATTAGATTACCAAGAAACAGGACAAGGGTTTGGCTAGGGACTTTTGACACAGCTGAAGATGCTGCCATTGCATATGACACAGCAGCATACATACTGAGAGGAGAATATGCTCAGTTGAACTTCCCAGATCTCAAGCATGTAATCCAGGCCAATTCTCTGAATGGAACCACTGCTGCACTTGTGGAGGCAAAACTACAAGCAATTTCTCAAGGTGTTTCTTCTCAAAGGAAGCCCACTGACTCACCAGCAGGGTCAAGCAATAAGCACAGTGATGAGAATGGAAAATTGAAAAGTACAAATGCCAAGGATTCAACCATGAAGGAGTGGCAGTTTGATACAGATAGAAGCAAAAGTACACACCATGAGATATCAGATGTGGAAACTGTTCAGTTAAGTAGAATGCCCTCCTTAGACATGGACATCATTTGGGATGAACTTTTAGTCTCTAATTCATGA 1209 0.4218 MKGTFLKKEIFTQKKFPTCLQEMATGSKFLDTAIMVGGSHSLTAYLHVLRSGATSSITSSQQLLSCSNSTSMKEEAPLATWISHIPAKFNGPQDIKNVIEKNQSNSIFPASDTKNSSIPLNLLETLPPLTMAPCFDEPVASSASSSAPPNFPNLTLVLQEPSMVYSSNMKGGEVMSVTSDPTYQVPHFGQNQHQAGSDAYKMDKINLTNSRSKSFNENWLSTTRTQPMKYGGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAIAYDTAAYILRGEYAQLNFPDLKHVIQANSLNGTTAALVEAKLQAISQGVSSQRKPTDSPAGSSNKHSDENGKLKSTNAKDSTMKEWQFDTDRSKSTHHEISDVETVQLSRMPSLDMDIIWDELLVSNS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1390 402 MobiDBLite consensus disorder prediction 320 340 - -
Pvu7g1390 402 Pfam AP2 domain 237 285 IPR001471 GO:0003700|GO:0006355
Pvu7g1390 402 PRINTS Ethylene responsive element binding protein signature 237 248 IPR001471 GO:0003700|GO:0006355
Pvu7g1390 402 PRINTS Ethylene responsive element binding protein signature 259 275 IPR001471 GO:0003700|GO:0006355
Pvu7g1390 402 MobiDBLite consensus disorder prediction 341 378 - -
Pvu7g1390 402 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 9 401 - -
Pvu7g1390 402 SUPERFAMILY DNA-binding domain 236 294 IPR016177 GO:0003677
Pvu7g1390 402 SMART rav1_2 236 299 IPR001471 GO:0003700|GO:0006355
Pvu7g1390 402 CDD AP2 235 295 IPR001471 GO:0003700|GO:0006355
Pvu7g1390 402 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF062 9 401 - -
Pvu7g1390 402 Gene3D AP2/ERF domain 236 294 IPR036955 GO:0003700|GO:0006355
Pvu7g1390 402 ProSiteProfiles AP2/ERF domain profile. 236 293 IPR001471 GO:0003700|GO:0006355
Pvu7g1390 402 MobiDBLite consensus disorder prediction 320 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1390 Pvu-Chr7 33385083 33386444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1390 43 397 AP2-EREBP Transcription Factor Family AT4G13620 41.192 2.61e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu7g1390 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1390 - - gmx:100820013 614.764