Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1357 ATGTATTGGGGAGTTATGGCAGGCAACATGGGGTGGGGAGTAATGGAGGAAGAGGGATGGAGGAAGGGTCCTTGGACTGCTGAAGAGGACAGATTACTCATTCAGTATGTCAGGTTGCATGGTGAAGGCAGATGGAACTCTGTTGCTAGGCTTGCAGGACTGAAAAGAAATGGAAAGAGCTGCAGACTGAGATGGGTGAATTACCTGAGACCAGACCTCAAGAAGGGTCAGATAACACCACAAGAAGAAAGCATAATTCAAGAGCTGCATGCTAGGTGGGGAAACAGGTGGTCAACGATTGCAAGAAGCTTGCCAGGAAGAACTGACAATGAGATCAAAAATTATTGGAGGACCCATTTCAAGAAAAAAACTAAAAGCCCCTCTGATGCTGCTGAGAAGGCTAGAATCCGTTCCTCAAGGAGGCAGCAGTTTCAACAGCAACAACTGCAGTTGAAGCATCAGCAGCAGGTTCAGCAGCAGCAGCAGCAGTTCCAATTCAACTTGGACATAAAAGGGATCATAAACTTGCTTGAAGAAAATGACCATAGAGTTCCTTCTACATCTCAAGAGACACAAGAAATGGTGAACATGTATCCAAACACTTCAGAGCCGCAGGGCTACTTCTACTCTATGTTCAATGTGAATGACAATGTCTCTGCACCAGAGTCCTCAAACGAAGAAATTCTGTGGGATGAACTGTGGAACTTGGACGATGTTCTTTGCAATTTCAATGCAGCAAGTGCTACAAGCAAAGCTAGTTTACACAATTTAGTTGCTCCTTTCAGTTAA 789 0.4474 MYWGVMAGNMGWGVMEEEGWRKGPWTAEEDRLLIQYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIIQELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKTKSPSDAAEKARIRSSRRQQFQQQQLQLKHQQQVQQQQQQFQFNLDIKGIINLLEENDHRVPSTSQETQEMVNMYPNTSEPQGYFYSMFNVNDNVSAPESSNEEILWDELWNLDDVLCNFNAASATSKASLHNLVAPFS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1357 262 Pfam Myb-like DNA-binding domain 75 119 IPR001005 -
Pvu7g1357 262 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Pvu7g1357 262 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Pvu7g1357 262 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Pvu7g1357 262 SUPERFAMILY Homeodomain-like 19 116 IPR009057 -
Pvu7g1357 262 CDD SANT 24 69 IPR001005 -
Pvu7g1357 262 Gene3D - 22 74 - -
Pvu7g1357 262 PANTHER MYB TRANSCRIPTION FACTOR 1 255 - -
Pvu7g1357 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Pvu7g1357 262 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 1 255 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pvu7g1357 262 CDD SANT 79 120 IPR001005 -
Pvu7g1357 262 Gene3D - 79 123 - -
Pvu7g1357 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Pvu7g1357 262 SMART sant 74 122 IPR001005 -
Pvu7g1357 262 SMART sant 21 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1357 Pvu-Chr7 32750261 32751552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1357 15 262 MYB Transcription Factor Family AT4G13480 52.768 1.46e-83 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu7g1357 Myb_DNA-binding 8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1357 K09422 - gmx:100813935 450.284