Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1347 ATGCTTAGATTGTATTTATATCACTTGGTGCAGGATGAAATTTCAAGCCCTCTTAGTGCTCGAATTTTTGAACTTTGTAACGCTGAATTTTTCCCAGAGGCTTTGCCAAATTCTGAGGTTACTTCCAGCTCAAACTGTTGCTATGAGGAGAACTCCTCGTATGCCACAACAAACAAATCTTTAACTGTAGATGTAGAAAATAAATTGAATAGCAATAGCAACACAGTCACAACGCCAACTAGCACTACCGCCACCACCACCAACAACACAACCAACAGTAGTAACCTGTCTATTATCTTTGACTCCCAAGAAGAAATTGACAATGACATCTCTGCCTCCATAGACTTCTCACTATCTCCATCTTTCAATGTTCCTCCATTTCTCCCAGTGACATCCCAGCAAGAACAGTTTGATTTCTCTTCAGTGCAGCCTCAGGTCCAATTACCAGCATTTTCAGTTGTGGAGGGCTTCTCTCAGTATCCCACTGACCCAGTTGCGCCTCCCCTTATGGGGGCTCCATTACCTTCTGTTTTTGAAGAGGATTGCATATCTTCTGTTCCTTCTTATGTGCCTCTCAACCCTTCATCTCCTTGCACTTATCTCAATCCTGGCATGCAACCATACATGCCTCCTGGTCCCCTTACTAGTGCCTTATCAACTGATAGTTCTGGATATTTTGGTGGGAACATTCTTCTTGGTTCCGAACTTCAGACACAAGAATTGGAATACCAAGGAGAAAATGGAAGAATGTATTGTACAGATTCAATTCAGCGGGTGTTTAACCCTCCAGACCTTCAGGCACTTGGTACTGAGAGTCAGCAACTAGTTTCCGGGGGTGGTAGTTCTGCCACTCTAACACCTGAAATCTCAAACTTAGAGGACTCCTCATTCAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAAAAGATCAATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCCTGCCGCAAAACTCTGGCAGATAGCCGACCTCGGGTTCGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAAACCAATAGAACTACAAGTAGCAATCATGAAGATGATGACGAAGACGAAATAGTTGTGAAAGATGAAGATGACATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGGGTGAACTCCTTCAAATGCAACTATTCCATCCAATCCTGGATTTGA 1218 0.4212 MLRLYLYHLVQDEISSPLSARIFELCNAEFFPEALPNSEVTSSSNCCYEENSSYATTNKSLTVDVENKLNSNSNTVTTPTSTTATTTNNTTNSSNLSIIFDSQEEIDNDISASIDFSLSPSFNVPPFLPVTSQQEQFDFSSVQPQVQLPAFSVVEGFSQYPTDPVAPPLMGAPLPSVFEEDCISSVPSYVPLNPSSPCTYLNPGMQPYMPPGPLTSALSTDSSGYFGGNILLGSELQTQELEYQGENGRMYCTDSIQRVFNPPDLQALGTESQQLVSGGGSSATLTPEISNLEDSSFKVGKLSVEQRKEKINRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGETNRTTSSNHEDDDEDEIVVKDEDDMVDSSDIFAHISGVNSFKCNYSIQSWI* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1347 405 ProSiteProfiles CCT domain profile. 307 349 IPR010402 GO:0005515
Pvu7g1347 405 MobiDBLite consensus disorder prediction 71 90 - -
Pvu7g1347 405 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 11 405 - -
Pvu7g1347 405 PANTHER CCT MOTIF FAMILY PROTEIN 11 405 - -
Pvu7g1347 405 MobiDBLite consensus disorder prediction 345 364 - -
Pvu7g1347 405 MobiDBLite consensus disorder prediction 345 369 - -
Pvu7g1347 405 Pfam CCT motif 307 349 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1347 Pvu-Chr7 31962436 31964922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1347 279 356 C2C2-CO-like Transcription Factor Family AT5G24930 38.554 1.45e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu7g1347 CCT 3.4e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1347 - - gmx:100813806 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1347 7 31962436 31964922 Pvu7g1347 7 31962436 31964922 ECH