Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1326 CTTGCAATTACAACAAGTGAAGGAAACCTAGGAGCACAAAACCAAAACCCCAATCAGCTACATAGCCTTTGGAAAAAAAAAGTAACTCTGGCAAATCCTTGGTGGACAGGCCAGGGGGGGTTATCTGGGATTGACCCAGGAACCCATTCACCTGGCCTAAGCAAACGCCACACAGACCTTGTAATCAATGAAAGCAGTGGTGGTCATGATATAGAAGAAGATGAAGACAATAGAGATGAACCGAAAGAGGGTGCAGTTGAGGTTGGAACCCGCAGACCAAGAGGAAGACCTCCTGGATCCAAAAACAAGCCAAAACCACCCATTTTTGTAACAAGGGACAGCCCAAACGCCCTGAGGAGTCATGTGATGGAGATAACTGGAGGAGCTGATGTTGCCGAAAGTGTAGCCCAGTTTGCAAGAAGGCGTCAGCGTGGAGTTTGTGTGCTCAGTGGAAGTGGCTCCGTGGCAAATGTTACTCTTAGACAACCTGCTGCTCCTGGAGCTGTTGTGGCACTTCATGGGAGGTTTGAGATTTTGTCCCTCACTGGGACTTTCTTACCTGGTCCAGCTCCTCCAGGATCCACAGGACTCACAGTGTATCTTGCTGGAGGACAGGGCCAAGTACTAGGAGGGAGTGTGGTTGGGCCTCTAGTTGCAACAGGACCAGTGATGGTGATTGCTGCAACTTTTGCCAATGCAACATATGAGAGACTTCCACTTGATGAAGATGACGAGGGGCCTAGTTCCGCCGCTGCGGTACAAGGAGGAGGATCACCGCCGCCACTTGGAATTGGAAGCGGTGGGGGCGTCCAGTTGCAGGGTGGGATGCCAGATCCATCATCTTTGCCTTTGTATAATCTTCCACCAAATGTAGGAGGGGGGCAAGTGGGGCATGAAGCCCTTGCTTGGGCTCATGGACGAACACCTTTCTGA 933 0.5102 LAITTSEGNLGAQNQNPNQLHSLWKKKVTLANPWWTGQGGLSGIDPGTHSPGLSKRHTDLVINESSGGHDIEEDEDNRDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEITGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGTFLPGPAPPGSTGLTVYLAGGQGQVLGGSVVGPLVATGPVMVIAATFANATYERLPLDEDDEGPSSAAAVQGGGSPPPLGIGSGGGVQLQGGMPDPSSLPLYNLPPNVGGGQVGHEALAWAHGRTPF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1326 310 PANTHER DNA-BINDING PROTEIN-LIKE 63 310 - -
Pvu7g1326 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 63 310 IPR014476 GO:0003680
Pvu7g1326 310 Pfam Plants and Prokaryotes Conserved (PCC) domain 119 231 IPR005175 -
Pvu7g1326 310 ProSiteProfiles PPC domain profile profile. 115 252 IPR005175 -
Pvu7g1326 310 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 243 - -
Pvu7g1326 310 CDD DUF296 119 230 IPR005175 -
Pvu7g1326 310 Gene3D - 118 245 - -
Pvu7g1326 310 MobiDBLite consensus disorder prediction 239 280 - -
Pvu7g1326 310 MobiDBLite consensus disorder prediction 64 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1326 Pvu-Chr7 28369510 28370563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1326 30 310 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 60.481 7.97e-102 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1326 - - var:108341460 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1326 7 28369510 28370563 Pvu7g1326 7 28369510 28370563 ECH