Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1312 ATGGAGGAGAACCAGAAGGGGAAGCAGGGAAAGGAAGAAGTGCGGTACCGCGGCGTGCGGCGGCGGCCGTGGGGGAAGTACGCGGCTGAGATAAGGGATCCATCAAAGCAAGGGTCGAGGGTGTGGTTGGGGACATTTGACACTGCTGAAGAAGCTGCTAGAGCTTATGATCGCGCGGCTTTTAACTTGAGGGGTCATCTTGCTACTCTCAATTTTCCTAGTGAGTACTATTCTCAAATAAGGGGTTCACCACCTTATCCACCTCATTTAGCACCACCTTCTTCTTCCTCTTCTCATGCTGCTGGATGCACTTCTTCCTCTGGTGCATATCATAGGCCTGTTTTCGAGATTCCTTGTTTGGATGATAAGGTTTTGGAGGATCTTCTTGGTCAATCAGAGGAGAACAAGAAGAAAAAGAAGGGAGAATAG 429 0.4942 MEENQKGKQGKEEVRYRGVRRRPWGKYAAEIRDPSKQGSRVWLGTFDTAEEAARAYDRAAFNLRGHLATLNFPSEYYSQIRGSPPYPPHLAPPSSSSSHAAGCTSSSGAYHRPVFEIPCLDDKVLEDLLGQSEENKKKKKGE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1312 142 Gene3D AP2/ERF domain 14 74 IPR036955 GO:0003700|GO:0006355
Pvu7g1312 142 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Pvu7g1312 142 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Pvu7g1312 142 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Pvu7g1312 142 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Pvu7g1312 142 MobiDBLite consensus disorder prediction 81 107 - -
Pvu7g1312 142 Pfam AP2 domain 15 66 IPR001471 GO:0003700|GO:0006355
Pvu7g1312 142 PANTHER ETHYLENE RESPONSE FACTOR 1 133 - -
Pvu7g1312 142 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Pvu7g1312 142 PANTHER DNA-BINDING DOMAIN 1 133 IPR044808 GO:0003700|GO:0009873
Pvu7g1312 142 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1312 Pvu-Chr7 27559597 27560279 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1312 13 137 AP2-EREBP Transcription Factor Family AT3G23230 64.800 1.14e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pvu7g1312 AP2 2.1e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1312 - - gmx:100776376 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1312 7 27559597 27560279 Pvu7g1312 7 27559597 27560279 ECH