Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1310 ATGGATATAGATTCATCCTCCTTCTTCAACTCCCCCTCTTCCGATTTCTCCTCCGAATCTTCCTCTCCGGATGCCTTCTCCTGGGAGGGATACCTCCCTTTCAACGAGAACGACCCGGAGGAGATGCTCCTCTACGGCATGATCGCCGGCGCCACCACAGCCGAGCGCACCGCCGACCGAGCGGGCTCTGAGGAGAGTGCGGCGCCGCAAAAGGAGAAGTCCTACCGCGGAGTGAGGCGACGGCCGTGGGGGAAGTTTGCGGCGGAGATTAGGGACTCCACACGGCACGGGATGAGGGTGTGGCTTGGGACATTCGACAGCGCGGAAGCCGCGGCTTTGGCTTACGACCAAGCGGCGTTTTCCATGCGCGGGTCCGCCGCGATTCTGAACTTCCCCGTTGATATCGTTAGAGAATCACTTAGGGAGATGAACTACGCGGTGGATAGCAGTGAAGAAGGGTGCTCCCCTGTTGTCGCTCTCAAGAGGAAACACTCCTTGCGGAGGAAAATTGGTGTAAAGAAAAACAACAAACAGAGTACCGTAGACAATGCGGTCGTGTTTGAAGACCTTGGTCCTGACTACTTGGAACAGTTGTTGATGTCCTCTGATCATATTCCCTCCTCCTTCTGA 630 0.5619 MDIDSSSFFNSPSSDFSSESSSPDAFSWEGYLPFNENDPEEMLLYGMIAGATTAERTADRAGSEESAAPQKEKSYRGVRRRPWGKFAAEIRDSTRHGMRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVDIVRESLREMNYAVDSSEEGCSPVVALKRKHSLRRKIGVKKNNKQSTVDNAVVFEDLGPDYLEQLLMSSDHIPSSF* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1310 209 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Pvu7g1310 209 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Pvu7g1310 209 SUPERFAMILY DNA-binding domain 74 134 IPR016177 GO:0003677
Pvu7g1310 209 MobiDBLite consensus disorder prediction 1 25 - -
Pvu7g1310 209 Gene3D AP2/ERF domain 73 134 IPR036955 GO:0003700|GO:0006355
Pvu7g1310 209 PANTHER DNA-BINDING DOMAIN 27 201 IPR044808 GO:0003700|GO:0009873
Pvu7g1310 209 MobiDBLite consensus disorder prediction 58 76 - -
Pvu7g1310 209 SMART rav1_2 74 138 IPR001471 GO:0003700|GO:0006355
Pvu7g1310 209 Pfam AP2 domain 74 124 IPR001471 GO:0003700|GO:0006355
Pvu7g1310 209 CDD AP2 73 134 IPR001471 GO:0003700|GO:0006355
Pvu7g1310 209 MobiDBLite consensus disorder prediction 1 32 - -
Pvu7g1310 209 MobiDBLite consensus disorder prediction 56 76 - -
Pvu7g1310 209 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 27 201 - -
Pvu7g1310 209 ProSiteProfiles AP2/ERF domain profile. 74 132 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1310 Pvu-Chr7 27274067 27275018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1310 32 204 AP2-EREBP Transcription Factor Family AT3G23240 60.870 4.30e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu7g1310 AP2 6.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1310 K14516 - gmx:100790598 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu6g1113 6 22259920 22260531 Pvu7g1310 7 27274067 27275018 ECH
Pvu1g1662 1 41988449 41989014 Pvu7g1310 7 27274067 27275018 ECH
Pvu7g1994 7 43194246 43194881 Pvu7g1310 7 27274067 27275018 ECH
Pvu7g1310 7 27274067 27275018 Pvu7g1310 7 27274067 27275018 ECH