Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1304 ATGAGTGAATACCTCCAGCGAGACTACGTCGTTTCGGAAGAGATCGGCCGGGGAAGATTCGGTACCGTGTATCGGTGCTCGTCGGCGGACTCTGGCGAGTTCTACGCCGTTAAATCCATTGACAAGGTAGCCATAAGTGCCGCCGGAGACTCCCTGGACACTCAATGCCTCTTTACTGAGGCCAAGATCGTTCAGCTTCTCTCCCCTCACCCTCACATCGTCAATCTTCACACCCTCTATGAAGACGAAACGCACCTCCACATGGTTCTCGACCTCTGTTACGAACCCAAGTTTCATCACCAGGTCATGCCGGAACGCGAAGCTGCTTCGGTGATGTGGCAGCTCATGAAAGCCGTGGCCCACTGCCACCTTCTCGGCGTGTCCCACCGAGACATAAAGCCCGACAACATTCTTTTCGATGAGGAGAATCGGCTGAAGCTAGCCGATTTCGGCTCGGCTGATACTTTTAAAGAGGGCGAGCCGATGAGCGGGGTGGTGGGGACGCCTCCTTATGTGGCTCCCGAGATCCTCGCCGGAAGGGATTATAACGAGAAAGTGGACGTGTGGAGTGGCGGCGTGGTTTTGTATCAAATGTTGGCCGGGTTTTTGCCCTTTCGAGGCGATTCCCCTGTGGAGATTTTTGAAGCTGTGCTGCACTCCAGTTTGAGATTCCCAACCCGGGTTTTTTCTTCTGTTTCACCTGCCGCCAAGGATCTCCTTCGTAGAATGTTGTGCAGAGATGTCTCTAGAAGGTTCTCTGCTGAACAAGTTCTGAGACACCAATGGTTTAGCATTACTGAACAGACTGACTGA 813 0.5314 MSEYLQRDYVVSEEIGRGRFGTVYRCSSADSGEFYAVKSIDKVAISAAGDSLDTQCLFTEAKIVQLLSPHPHIVNLHTLYEDETHLHMVLDLCYEPKFHHQVMPEREAASVMWQLMKAVAHCHLLGVSHRDIKPDNILFDEENRLKLADFGSADTFKEGEPMSGVVGTPPYVAPEILAGRDYNEKVDVWSGGVVLYQMLAGFLPFRGDSPVEIFEAVLHSSLRFPTRVFSSVSPAAKDLLRRMLCRDVSRRFSAEQVLRHQWFSITEQTD* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1304 270 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Pvu7g1304 270 SUPERFAMILY Protein kinase-like (PK-like) 4 264 IPR011009 -
Pvu7g1304 270 Gene3D Transferase(Phosphotransferase) domain 1 93 270 - -
Pvu7g1304 270 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 267 - -
Pvu7g1304 270 SMART serkin_6 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1304 270 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pvu7g1304 270 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1 4 267 - -
Pvu7g1304 270 Pfam Protein kinase domain 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1304 270 CDD STKc_CAMK 8 262 - -
Pvu7g1304 270 ProSiteProfiles Protein kinase domain profile. 9 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1304 270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1304 Pvu-Chr7 26243565 26244736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1304 9 263 EF-hand Containing Proteins AT1G50700 39.924 9.36e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu7g1304 Pkinase 6.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1304 - K08794 gmx:547731 483.411