Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu7g1285 | ATGAATTCAGAGAAGCCAGTCAGCCCTGAGAATTTAAGTGATGAAAATGATCAAGAAGAAGCACATGATGACACTGGTGGAACCAAACGCTCTTATGAGTGCACATTCTGCAAAAGAGGCTTCACAAACGCTCAGGCATTAGGGGGTCACATGAATATCCATAGGAGAGACAGGGCCAAGGCCAAGCAATTAACACTTGACGCTTCACCTTCAATGAACAAATTCAACAGTGATGAATCCATAGTCTTTCCTTTTGTCTCAGAAACTTTAAACCAACCCGCAAGGCCTTACTCCATTTTGGAGTCTCAGAGGAACTGTGACATGCAATTTCATCCACCAGCACCTGCAAGTGCCTTTTATTATGAGCTTTACGACCCGAGGTCTCGATCTTTAACTTTTAACCAAGAGCTTGGCGGTGCCAACTTGAGTCTCCAAATTGGTCAAACTCATCATGTGGATGATAACATTCATCAAGTCAGGAGAGGAAACCAGAAAGATAATGAAGTGGACTTGGAGCTCAGACTTGGCCATGATCCATACTGA | 543 | 0.4365 | MNSEKPVSPENLSDENDQEEAHDDTGGTKRSYECTFCKRGFTNAQALGGHMNIHRRDRAKAKQLTLDASPSMNKFNSDESIVFPFVSETLNQPARPYSILESQRNCDMQFHPPAPASAFYYELYDPRSRSLTFNQELGGANLSLQIGQTHHVDDNIHQVRRGNQKDNEVDLELRLGHDPY* | 181 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu7g1285 | 180 | PANTHER | OS07G0101800 PROTEIN | 13 | 179 | - | - | |
Pvu7g1285 | 180 | SUPERFAMILY | beta-beta-alpha zinc fingers | 29 | 58 | IPR036236 | - | |
Pvu7g1285 | 180 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 13 | 179 | - | - | |
Pvu7g1285 | 180 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 32 | 59 | IPR013087 | - | |
Pvu7g1285 | 180 | Pfam | C2H2-type zinc finger | 32 | 56 | - | - | |
Pvu7g1285 | 180 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 34 | 54 | IPR013087 | - | |
Pvu7g1285 | 180 | Gene3D | Classic Zinc Finger | 13 | 83 | - | - | |
Pvu7g1285 | 180 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Pvu7g1285 | 180 | SMART | c2h2final6 | 32 | 54 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu7g1285 | Pvu-Chr7 | 25165822 | 25166895 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu7g1285 | 25 | 180 | C2H2 Transcription Factor Family | AT3G53820 | 33.333 | 4.44e-17 | 72.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pvu7g1285 | zf-C2H2_6 | 2.4e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu7g1285 | - | - | vun:114191365 | 316.235 |