Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1282 ATGGTCCTAGGAAACCGAGTGGAATGTTTCAGTATGAGAGCTAAGAGTTTAATAAGTAAAAAGCAGATTAGCCTAAGATTGAGAAAAATGATAAAGTGTATGTGCTCTGGGGAACAGTTGAAGGTAGATGAATTAGGTTACTCATCGGAATCCCTAGCAACAAGAGATTATTCAGCAAGTGGTGGGTATTCATCTCGACCTGGTGAAAACGACACAAAGGTTGACAACACCAACATTGAAGAAGCAGAGTCTTCTCTTCGTGAAAGTGGTTATTTAAACTACGAGGAAGCTAGAGCTTTGCTTGGAAGACTTGAGTATCAGAAAGGCAATGTCGAAGCTGCACTTCATGTGTTTGAAGGAATAGATATTGCTACTGTCGTTCCCAAGATCAAAGTTTCTATATCTAGAAGTTGTGAACCTAATAGACGCCGTTCGCAAAGTGATACTCACCCTCCTATGTCAATGCATGCTGTTAGTTTAATTCTTGAAGCTGTCTTTCTCAAGGCCAAATCGCTGCAGGCTCTAGGAAGGTTTCAAGATGCTGCTCAGTCATGCAAGATAGTTTTAGACACTGTTGAATCAGCTTTACCAGAAGGCTGGCCTGAAAACTTCGTTTCAGACTGTAAACTGCAAGAGACAGTGGCAAATGCTGTAGAACTGCTTCCAGAGTTGTGGAAGCTTACAGGCTCTCCTCAAGATGTCATCTCATCGTTTAGGAGGGCCCTGCTTTATCATTGGAATCTTGGCACTAAAGCCACGGCAAGAATACAAAAGGAATTTGCTTTTTTTCTTCTGTATAGTGGTTGTGAAGCTAGCCCTCCTGCTCTCCGCTCTCAGTTGGATGGTTCTTTTGTGCCAAGAAGCAACCTAGAAGAGGCTGTTCTTCTGCTTCTGATTTTGCTGAGAAAATCTATTCTTGGATACATTGTATGGGACCCTTCATTAATTGATCACCTTTCTTTTGCTTTAAGTGTTTCAGGGGAATTCATGACTCTAGCTCAGCAGGTTGAGGAATTGCTTCCTGAAAACATGGACAGAAAAGAAAGATACTATACTCTAGCTCTTTGTTACAGTGGAGAAGGTGAACATACGACTTCTTTGGATCTTCTAAGGAACTCTTTGAACCATAGAGAGAACTCAGACTGCATAAAGGAGTTACTTCTAGTTTCAAAAATTTGTGCAGAAAAGAATATTTACACTGAAGAAGGAATCAAATATTCTGTCAAAGCCATTTCTCAGTTGAATGGAAAGTGCATGCAGATGGTAGCTATTGCAAATTGCTTGCTAGGTGTTCTACTGTCATCAAAATCCAAGTCAGCTGCTTCTGAATCGGAGAAGGTTGTTTTGCAGTCTGAAGCTCTCAGTGCTCTAAAAGATTCCGAGAGAACGATGAGGGAAAGTGATCCTTACATTGTCCTTCATCTTTGTCTAGAGTATGCTGAACAGAGGAAGTTAAGCATTGCTATTGATCATGCAAAGAAACTGATTAAGCTTGAGGGTGGATCTAGTGTTAGAGGATATATTCTACTAGCGCGGATTTTATCTGCTCAACGAAAATTTGAAGATGCAGAGCTTGTTATAGATGCTGCTCTAGATCAAAGTGGGAAATGGGATCAAGGAGAATTGTTGAGAACTAAAGCTAAACTACGGATTGCACAGGGAAAATTAAATAATGCAGTGGAAACATATACTTTTCTTCTTGCTGTTCTTCAGGTCCAAAATAAAAGTTTAGGCACGGCAAGTAAGATCAAGGGAAACCGTGACAAAAGACTGGAAATGGAAATATGGCACGATTTAGCCAATGTGTACGCGACCTTATCGCAGTGGCGGGATGCTGAAGTTTGTCTAGCAAAATCTGAGAATATTAATCCCTATTCTGCTTCTAGATGGCACACAAAGGGTTTACTTTTTGAAGCCAGAGGTCTTCATCAAGAGGCTCTGAAATCATTTAGGAAAGCATTAGATATTGAGCCCAACTATGTGCCAAGTTTGATATCCACAGCCTGTGTACTCAGGCAACTTGGTGGTCAATCATCTTCGATAGTTAGAAGCCTTCTCACTGATGCATTGCGCCTTGACAGAACAAACCCATCAGCTTGGTACAATCTTGGACTGTTCTACAGAGCTGATTTGGGGACATCGGCAATGGAAGCTGTCGAATGCTTTGAAGCAGCAGCTTTTCTTGAAGAATCTACTCCTATTGAACCCTTTAGATAA 2217 0.4105 MVLGNRVECFSMRAKSLISKKQISLRLRKMIKCMCSGEQLKVDELGYSSESLATRDYSASGGYSSRPGENDTKVDNTNIEEAESSLRESGYLNYEEARALLGRLEYQKGNVEAALHVFEGIDIATVVPKIKVSISRSCEPNRRRSQSDTHPPMSMHAVSLILEAVFLKAKSLQALGRFQDAAQSCKIVLDTVESALPEGWPENFVSDCKLQETVANAVELLPELWKLTGSPQDVISSFRRALLYHWNLGTKATARIQKEFAFFLLYSGCEASPPALRSQLDGSFVPRSNLEEAVLLLLILLRKSILGYIVWDPSLIDHLSFALSVSGEFMTLAQQVEELLPENMDRKERYYTLALCYSGEGEHTTSLDLLRNSLNHRENSDCIKELLLVSKICAEKNIYTEEGIKYSVKAISQLNGKCMQMVAIANCLLGVLLSSKSKSAASESEKVVLQSEALSALKDSERTMRESDPYIVLHLCLEYAEQRKLSIAIDHAKKLIKLEGGSSVRGYILLARILSAQRKFEDAELVIDAALDQSGKWDQGELLRTKAKLRIAQGKLNNAVETYTFLLAVLQVQNKSLGTASKIKGNRDKRLEMEIWHDLANVYATLSQWRDAEVCLAKSENINPYSASRWHTKGLLFEARGLHQEALKSFRKALDIEPNYVPSLISTACVLRQLGGQSSSIVRSLLTDALRLDRTNPSAWYNLGLFYRADLGTSAMEAVECFEAAAFLEESTPIEPFR* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1282 738 Pfam Tetratricopeptide repeat 478 533 - -
Pvu7g1282 738 Pfam Tetratricopeptide repeat 628 660 IPR019734 GO:0005515
Pvu7g1282 738 SMART tpr_5 162 195 IPR019734 GO:0005515
Pvu7g1282 738 SMART tpr_5 504 537 IPR019734 GO:0005515
Pvu7g1282 738 SMART tpr_5 347 380 IPR019734 GO:0005515
Pvu7g1282 738 SMART tpr_5 627 660 IPR019734 GO:0005515
Pvu7g1282 738 SMART tpr_5 593 626 IPR019734 GO:0005515
Pvu7g1282 738 Gene3D Tetratricopeptide repeat domain 76 575 IPR011990 GO:0005515
Pvu7g1282 738 ProSiteProfiles TPR repeat profile. 627 660 IPR019734 GO:0005515
Pvu7g1282 738 MobiDBLite consensus disorder prediction 57 76 - -
Pvu7g1282 738 PANTHER OS10G0471400 PROTEIN 22 738 - -
Pvu7g1282 738 MobiDBLite consensus disorder prediction 57 72 - -
Pvu7g1282 738 Gene3D Tetratricopeptide repeat domain 576 734 IPR011990 GO:0005515
Pvu7g1282 738 PANTHER PROTEIN NPG1 22 738 IPR043376 -
Pvu7g1282 738 SUPERFAMILY TPR-like 541 708 IPR011990 GO:0005515
Pvu7g1282 738 SUPERFAMILY TPR-like 336 563 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1282 Pvu-Chr7 24606775 24611569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1282 27 738 Calmodulin-binding Proteins AT4G28600 52.812 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1282 K21843 - gmx:100789469 1248.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1282 7 24606775 24611569 Pvu7g1282 7 24606775 24611569 ECH