Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1253 ATGAGGATTATGATAAAGGGCGGTGTTTGGAAAAACACCGAAGATGAAATCCTGAAAGCGGCTGTCATGAAATATGGTAAGAACCAGTGGGCTCGAATCTCTTCACTCCTTGTTCGCAAATCTGCCAAGCAATGCAAAGCTCGCTGGTATGAGTGGCTCGATCCCTCCATAAAAAAAACTGAGTGGACTAGAGAAGAGGACGAAAAGCTACTTCATCTTGCCAAGCTTATGCCCACTCAATGGAGAACAATTGCTCCAATTGTGGGCCGCACCCCTTCCCAGTGTCTTGAGCGGTATGAGAAGCTCCTTGATACAGCCTGTGTGAAAGATGAGAACTATGAGCCTGGTGATGATCCTCGGAAATTGCGTCCTGGGGAGATTGATCCAAATCCTGAGTCAAAACCTGCACGACCTGATCCTGTTGATATGGATGAAGATGAAAAGGAGATGCTTTCTGAAGCACGAGCCCGGTTAGCCAACACGAAGGGAAAGAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCCAGGAGGCTTGCTTCTTTACAAAAGAAGAGAGAATTGAAGGCTGCAGGAATTGATATTAGGAAGCGGAAGAGAAAGAGGAAAGGAATAGACTACAATGCGGAAATTCCATTTGAGAAAAGGCCTCCTTCAGGCTTTTTTGATGTTACGGATGAAGATAGACCAGTGGAACAGCCCAAGTTTCCTACTACAATTGAAGAACTTGAAGGTAAAAGGAGGGTTGATATTGAGGCACAATTAAGAAAGCAGGACATCGCAAAAAATAAAATTGCAGAAAGGCAAGATGCCCCATCTGCCATATTGCATGCCAACAAGCTGAATGACCCAGAAACAGTAAGAAAGAGGTCAAAATTGATGCTTCCACCACCCCAGATTTCTGACCAGGAATTGGATGAAATTGCAAAGTTGAGTTATGCTGGTGACCTTATAGGGAGTCAGGAACTTGCTGAAGGTAATAGTGCAACACGGGCACTTCTGGCTAATTACGCGCAGACACCTGGTCACGGAGCGACTCCTCTCCGAACCCCTCAGAGAACACCAGCTGGTAAAGGAGATGCTATTATGATGGAAGCTGAAAATTTGGCCAGGTTGAGGGAGTCTCAAACACCATTGTTAGGAGGAGAGAACCCGGAGTTGCATCCTTCAGATTTTTCGGGTGTCACCCCTAAGATAAAAGACATTCAGACACCAAATCCAATGCTGACACCTTCTGCAACTCCTGGAGGTGCAGGTCTCACTCCTAGAATTGGCGTGACACCATCAAGAGATGGTTCTTTTAGCATGACACCAAAGGGAATTACTCTTAGGGATGAGCTACATATTAATGAGGACAGGAATATGCTTGACAGCTCTAAACTTGAGCTACATAGACAGGCTGATATGAGGAGAAGTTTGCAATATGGTTTAGGAAGCCTTCCACAGCCCAAAAATGAGTACCAAATAGTGATGGAACCAGTTCAAGAAGACACAGAAGAGCCCGAGGAGAAGATTGAAGAGGATATGTCTGATAGAATAGCTAGAGAAAAAAAGGAAGAAGAGGCAAGACAACAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAGCGGGAACTTCCTAGGCCTCCTGCTGCATCATTGGAGCTCATAAGAAATTCCTTGATGAGAATTGATGGGGACAAAAGTTCGTTTGTTCCACCAACTTCTATTGAACAAGCTGATGAGATGATTAGAAGGGAGCTTCTAACTTTACTGGAGCATGACAATGCTAAGTATCCCTTTGATGATAAAGTGAATAAGGAGAAAAAGAAAGGAGTCAAACGAGCCGCAAATGGGTCTGCCGTCCCTGTGATTGAAGATTTTCAGGAAGATGAAATGAAAGATGCTGATAAGTTGATAAAGGAAGAGGCCCAGTATGTTTGTGCAGCAATGGGACATGAAAATGAACCTCTCGATGAATTTATTGAAGCACACAGAACCTGTCTCAATGATCTCATGTACTTTCCTACTCGTAATGCGTATGGTCTTTCTAGTGTTGCCGGGAACATGGAAAAACTAGCAGCTTTACAGAATGAATTTGAGAATTTAAGAAACAAATTGGATGATGGTAATGAGAAGATGGTACGGTTTGAGAAGAAGGTGTTGGTTCTCACACAAGGCTATGAGATGAGGGTAAAGAAAAGCCTCTGGCCGCAAATTGAGGCCACTTTCAAGCAGATGGACATAGCTGCGACTGAATTAGAATGCTTTAAAGCTTTGCAAAAGCAGGAGCAATTAGCAGCATCACATAGGATACACAATCTATGGGCTGAAGTACAGAAGCAAAAGGAACTTGAGAAAACTTTGCAAAATAGGTACGGGAGTCTAATTAAAGAGCTGGAGAAGGTGCAAAATATCATGGATCGATGCAGATTACAAGCACAAGAGATTGAAGCAAACAACCATGCTCTTGAGTCAACTGAGATCACCGAGACCACCCATAAAACTGATGTACAGGGTACAGAGAATCGTGAAGTTGTACCTCACTCGGAGGAGAATGGAAATGCTCTAGCACGTGATGGAACTGCTGACCAGCAAGTAGATATTGTGCAGGACCAGGCTACTTCTAGCCCCAGTTATGACATGGATGTAGATTCTCATAAAATGCAAACGATACATGACACTGATGTTAAATTTACAAATGCTTCACCAGCTGCAGGGAATGTTGCACAAAAAATGGATGGTACCAGTACTACTGAAGGCAATGCTGACAATGGGGAGGCCATGCCAGAAATGGGTGGTATAGTGGAAACAAGTAGCCTCAATCATGGTGTATTTGCAGATGCTGTAAACCCACGTGACAGCAGCTTGGAAGAATCCAATGCTGTCGGGGAGGAGACAAATTAG 2892 0.4385 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDTACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRKRKRKRKGIDYNAEIPFEKRPPSGFFDVTDEDRPVEQPKFPTTIEELEGKRRVDIEAQLRKQDIAKNKIAERQDAPSAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLSYAGDLIGSQELAEGNSATRALLANYAQTPGHGATPLRTPQRTPAGKGDAIMMEAENLARLRESQTPLLGGENPELHPSDFSGVTPKIKDIQTPNPMLTPSATPGGAGLTPRIGVTPSRDGSFSMTPKGITLRDELHINEDRNMLDSSKLELHRQADMRRSLQYGLGSLPQPKNEYQIVMEPVQEDTEEPEEKIEEDMSDRIAREKKEEEARQQALLRKRSKVLQRELPRPPAASLELIRNSLMRIDGDKSSFVPPTSIEQADEMIRRELLTLLEHDNAKYPFDDKVNKEKKKGVKRAANGSAVPVIEDFQEDEMKDADKLIKEEAQYVCAAMGHENEPLDEFIEAHRTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQNEFENLRNKLDDGNEKMVRFEKKVLVLTQGYEMRVKKSLWPQIEATFKQMDIAATELECFKALQKQEQLAASHRIHNLWAEVQKQKELEKTLQNRYGSLIKELEKVQNIMDRCRLQAQEIEANNHALESTEITETTHKTDVQGTENREVVPHSEENGNALARDGTADQQVDIVQDQATSSPSYDMDVDSHKMQTIHDTDVKFTNASPAAGNVAQKMDGTSTTEGNADNGEAMPEMGGIVETSSLNHGVFADAVNPRDSSLEESNAVGEETN* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1253 963 CDD SANT_CDC5_II 55 106 - -
Pvu7g1253 963 Pfam Myb-like DNA-binding domain 10 70 - -
Pvu7g1253 963 SMART sant 58 105 IPR001005 -
Pvu7g1253 963 SMART sant 6 55 IPR001005 -
Pvu7g1253 963 MobiDBLite consensus disorder prediction 900 926 - -
Pvu7g1253 963 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Pvu7g1253 963 Pfam pre-mRNA splicing factor component 406 653 IPR021786 -
Pvu7g1253 963 MobiDBLite consensus disorder prediction 942 963 - -
Pvu7g1253 963 MobiDBLite consensus disorder prediction 900 919 - -
Pvu7g1253 963 Gene3D - 5 59 - -
Pvu7g1253 963 Coils Coil 795 822 - -
Pvu7g1253 963 Coils Coil 167 187 - -
Pvu7g1253 963 MobiDBLite consensus disorder prediction 110 150 - -
Pvu7g1253 963 Gene3D - 60 114 - -
Pvu7g1253 963 Coils Coil 681 715 - -
Pvu7g1253 963 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Pvu7g1253 963 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Pvu7g1253 963 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Pvu7g1253 963 MobiDBLite consensus disorder prediction 949 963 - -
Pvu7g1253 963 CDD SANT 10 53 IPR001005 -
Pvu7g1253 963 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Pvu7g1253 963 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1253 Pvu-Chr7 22033909 22039246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1253 1 824 MYB-Related Transcription Factor Family AT1G09770 75.090 0.0 1213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu7g1253 Myb_Cef 5e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1253 K12860 - gmx:100790369 1573.91