Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1241 ATGAAAATGCTTCTTCATTCCTGCGAAACACTATCTGAACCTCGTTATGAGGAGAAACATGAGGTTTCCTACAGAGGGGTTCGAAAGCGGGGACGTGGCAACTTCGCGGCGGAGATAAGGGACTCTACGAGTAACGGGGCGAGGGTTTGGTTGGGAACCTTCGACACTGCCGAGGATGCTGCTTTGGCTTACGACCAAGCTGCAATAACAACGCGTGGCGACAAAGCTGTTCTCAATTTCCCTCCTCAACTCGTTCTGCAATCGCTGCACAACATGGACTTCAGGTTCCAGAGAGGGCTCTCTCCCATTCTGGAACTGAAGAAGAGAAACTTCGTGAAGAGGAGGGTGGAGTGCAGGAAGATGAGAAGAAAGAATCACAGGCATATAGGAGTGGAAAATATTGTGGTTTTGGAAGATCTGGGAGCAGATTATTTGGAAGAGCTTCTCACACTCACTGAACATTAA 465 0.486 MKMLLHSCETLSEPRYEEKHEVSYRGVRKRGRGNFAAEIRDSTSNGARVWLGTFDTAEDAALAYDQAAITTRGDKAVLNFPPQLVLQSLHNMDFRFQRGLSPILELKKRNFVKRRVECRKMRRKNHRHIGVENIVVLEDLGADYLEELLTLTEH* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1241 154 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Pvu7g1241 154 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Pvu7g1241 154 ProSiteProfiles AP2/ERF domain profile. 23 81 IPR001471 GO:0003700|GO:0006355
Pvu7g1241 154 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B-LIKE 15 152 - -
Pvu7g1241 154 CDD AP2 24 83 IPR001471 GO:0003700|GO:0006355
Pvu7g1241 154 SMART rav1_2 23 87 IPR001471 GO:0003700|GO:0006355
Pvu7g1241 154 Pfam AP2 domain 23 72 IPR001471 GO:0003700|GO:0006355
Pvu7g1241 154 PANTHER DNA-BINDING DOMAIN 15 152 IPR044808 GO:0003700|GO:0009873
Pvu7g1241 154 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Pvu7g1241 154 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1241 Pvu-Chr7 21423708 21424172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1241 19 154 AP2-EREBP Transcription Factor Family AT3G23240 52.174 5.20e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu7g1241 AP2 2.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1241 K14516 - pop:18110456 164.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1241 7 21423708 21424172 Pvu7g1241 7 21423708 21424172 ECH