Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1238 ATGGCCAACCGGTGGTGGACCGGCTCTGTGGGTCTAGAGAACTCGGGTGACTCCATGAGAAAACCGGATCTGGGGTTTTCTATGAACGACAGTGCGGTCACTGGGAACCACGCCGGGGAAGAAGAAGAAGAAGAGAAAGAAAACAGCGACGAGCCCAAAGAAGGAGCTATTGACGTGGCCAACACGCGCCGCCCGAGGGGTCGTCCACCAGGTTCTAAGAACAAGCCCAAACCGCCAATATTCGTCACGCGAGACAGCCCTAACGCGCTGCGAAGCCACGTCATGGAGATAGCCAGCGGCGCCGACATCACCGACTGCGTGCTCCAGTTCGCGCGGAGGCGCCAGCGCGGCGTGTCCATTCTCAGCGGCAGCGGGGCCGTCGTCAACGTGACTCTCCGCCAGCCCACAGCTCCCGGGGCCGTCATGGCTCTCCACGGCCGCTTCGACATCCTCTCCCTCACCGGCTCGTTTCTTCCCGGACCGTCCCCGCCCGGTGCCACCGGTCTCACCATCTATCTTGCTGGAGGGCAGGGACAGATCGTGGGCGGCGGGGTGGTGGGACCGCTGGTGGCGGCTGGTCCAGTTTTGATAATGGCGGCTACGTTTTCCAATGCAACGTACGAGAGATTGCCCTTGGAGGAGGATGATCAGGAGCAGGGCGGTGGCGGTGGGTCTCCGCCAGGGATGGGAGGTGGTCCTGGGGAAGCGTCGTCGTCAATTTCGGTGTACAATAATAATGTTCCTCCGAGTTTGGGTGGTCCGAATGGACAACAGGTGAACCATGAAGCTTATTCTTCTGCTTGGGGTCATGCTCCTCATTCCAGACCTCCTTACTAA 837 0.6033 MANRWWTGSVGLENSGDSMRKPDLGFSMNDSAVTGNHAGEEEEEEKENSDEPKEGAIDVANTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEIASGADITDCVLQFARRRQRGVSILSGSGAVVNVTLRQPTAPGAVMALHGRFDILSLTGSFLPGPSPPGATGLTIYLAGGQGQIVGGGVVGPLVAAGPVLIMAATFSNATYERLPLEEDDQEQGGGGGSPPGMGGGPGEASSSISVYNNNVPPSLGGPNGQQVNHEAYSSAWGHAPHSRPPY* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1238 278 MobiDBLite consensus disorder prediction 237 264 - -
Pvu7g1238 278 CDD DUF296 91 174 IPR005175 -
Pvu7g1238 278 Gene3D - 90 219 - -
Pvu7g1238 278 ProSiteProfiles PPC domain profile profile. 87 227 IPR005175 -
Pvu7g1238 278 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 216 - -
Pvu7g1238 278 MobiDBLite consensus disorder prediction 214 278 - -
Pvu7g1238 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 11 270 - -
Pvu7g1238 278 PIRSF ESCAROLA 12 278 IPR014476 GO:0003680
Pvu7g1238 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 270 IPR014476 GO:0003680
Pvu7g1238 278 MobiDBLite consensus disorder prediction 1 87 - -
Pvu7g1238 278 Pfam Plants and Prokaryotes Conserved (PCC) domain 91 204 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1238 Pvu-Chr7 21091737 21093255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1238 1 278 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 54.849 4.72e-87 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1238 - - gmx:100797639 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1238 7 21091737 21093255 Pvu7g1238 7 21091737 21093255 ECH