Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1211 ATGTGCCAACAATCTCTTGCCCCGGAGTTGAATTTGTTACATGCTTCTCCTACCAAAGTTATTGAACAAGTGCATTCGTCCAATTCCAATGATGTGAAAATGTTGAAGGTTCCCTTTGATCTTAATGCAAAATTTGATGAGGAGGATCAAATTTCTTGCTCCAATGAAGCACATGCCAAAGTTGGTTGCAGTGAAGCCATTCAGCCTTTACCTTCATCTTATTTGGAGGTCACTCCAGAAGATGTTCCTCCTACAGACAATGATAATGAGGATAGATCCAGTGTTGTTGGGGGAGGATCACACACTTCTCAGAACAGGAAGAGAAAGAGATCAGTTGAGGAATGTGAGAAAGGGAGAGGGAAGGCTTTTCGTAGAGACAATGTGGAAGTGAAGATTAAGAGACAAAACGAGAATACAGTAGATGATGGTTATCACTGGAGAAAATATGGTCAAAAGCCTATTAAGGGAAATGTATTCCCTAGGGCCTACTACAAATGCACAACTGCTGGGTGTTCTGTAAAGAAGCACGTGGAACGTGATTCGCGCAACCAAAAAAATTTGATTAGTACTTATGAGGGAAGACACAATCATGAACAACCAACCTTTAGGAACCCTAGCAAACAATATGAAGATGATGAAGATGATGAAGAAGATGAAGAAGATGAAGAACTTGCTGCTGTTGCTGCAGCCAATACCCTATTGACTTTTGGATCACCTGTGAATTTTTTCAATACCTCAAACCTTGCAGAACCTCGAGTTCATACTCTTCAACTACTTCCTAATGACCCAAATCCTGAATTTTTCAATAGGTTCATGAGACCCAACCATTTGGGAAGTTTCAATTATAACATGAATATTGGGTCTTCCTCCTACACTCCCCGAATGCATTATTCTTCTTTCATGAATAATGCCGTTACCATGCCTTACCCTTCCTATGGACCTAACCTTGACCACTATGCTGCCCCTCAACCTAGGCTTCCAATTCCACCACCATTCAACAACATGACTTTTTCTTTTGGAGTTCAGTGTTTCGTTTCAGAGAAACAAGTGCAAGAGATCGTAGCTGGCACTAGTTATTTAATTGACAGTTATCATTGA 1098 0.4062 MCQQSLAPELNLLHASPTKVIEQVHSSNSNDVKMLKVPFDLNAKFDEEDQISCSNEAHAKVGCSEAIQPLPSSYLEVTPEDVPPTDNDNEDRSSVVGGGSHTSQNRKRKRSVEECEKGRGKAFRRDNVEVKIKRQNENTVDDGYHWRKYGQKPIKGNVFPRAYYKCTTAGCSVKKHVERDSRNQKNLISTYEGRHNHEQPTFRNPSKQYEDDEDDEEDEEDEELAAVAAANTLLTFGSPVNFFNTSNLAEPRVHTLQLLPNDPNPEFFNRFMRPNHLGSFNYNMNIGSSSYTPRMHYSSFMNNAVTMPYPSYGPNLDHYAAPQPRLPIPPPFNNMTFSFGVQCFVSEKQVQEIVAGTSYLIDSYH* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1211 365 MobiDBLite consensus disorder prediction 75 120 - -
Pvu7g1211 365 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 310 IPR044810 GO:0003700
Pvu7g1211 365 MobiDBLite consensus disorder prediction 190 219 - -
Pvu7g1211 365 Pfam WRKY DNA -binding domain 141 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g1211 365 SMART WRKY_cls 140 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g1211 365 Gene3D WRKY domain 124 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu7g1211 365 MobiDBLite consensus disorder prediction 106 120 - -
Pvu7g1211 365 SUPERFAMILY WRKY DNA-binding domain 136 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu7g1211 365 ProSiteProfiles WRKY domain profile. 135 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g1211 365 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 24 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1211 Pvu-Chr7 18968507 18974116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1211 103 203 WRKY Transcription Factor Family AT5G56270 49.020 6.95e-25 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu7g1211 WRKY 2.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1211 K18835 - var:108323080 444.121