Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1210 ATGAATTGTTCAGGGTGCGAAGGTCTTGGTTCTACCCAAGTTGTTGAACAAGTGCATTCATCGAATTCCAATGATGAGATAAGAGTGAAGTTTCCATTTGATCTTAATGCTGAAGTTGATGAGGTGGACTCAATTTCTTGCACTGAGGAAGCATGTTCGAAAGTTGGTGAAAGCATTCTCACTTTACCTTCCACTAATTTGGAGGGCACAGCAGAAGATGTTGTTCCTACAGAAGTGGAGAATGAAGATAGAGCAAGTGTGGTCGAGGGAGGAACAACAACCTCTGAAAGCAGGAAGAGAAAGAGATCTGTAGAGGAATATGAGAAAGGGAATAATGTGAGGTCATTTCGCGGTAACACATTGACTGTAAATGTTGAAAGCCGAAGAAAGACCATGGTGGACGATGGTTATCGTTGGCGAAAGTATGGCCAAAAAACTATAAAGGGAAATTTGTTCCCTAGGGCCTACTACAAATGCACAAGTTCTGGGTGTTGTGTAAGGAAGCACGTGGAACGAGATTCGCGCAACAGAAAGAATGTGATCACTACTTACGAGGGAAAACACAATCATGAACAACCATCCCCTAAGAACCCTAAAAAACACTGTGCAGAAGATGAAGAAGATGAACAAGATGAATATGAAGAAGATGAAGAACTTGCTATTCCTGCATCCAATGCTTTATGGAGTTTTAGATTATCTGAGAGTAGGAACTTTCTCAACACTCCACACCCTGCACAACCTCACACTCCACACCCAGCACAACCTCACACTCCACACCCAGCACAACCTCACACTCTTCAACTATCTCGTAATGACACAAATCCTGGATTTGCCTACACTAGGTCTGTGTGGCGTAACTGTTTTGGAAGTTTCAACAGTAACATGAATATTGGGTCTTCCTCTTACAGCCCCCAAATTCATTATTCTTCTTTCTTGAACAATACCAATACCATACCTTACCGTTTCTATGGACTTGACCTTAACCCTTATGCTGCCCCTCAACCCCAGTTTCCAGTGATTCCTTCTTCTTCTGAAGTTTTTTCTCGCTCTAGGGTTAATGCTAATGGCAATTGA 1074 0.4236 MNCSGCEGLGSTQVVEQVHSSNSNDEIRVKFPFDLNAEVDEVDSISCTEEACSKVGESILTLPSTNLEGTAEDVVPTEVENEDRASVVEGGTTTSESRKRKRSVEEYEKGNNVRSFRGNTLTVNVESRRKTMVDDGYRWRKYGQKTIKGNLFPRAYYKCTSSGCCVRKHVERDSRNRKNVITTYEGKHNHEQPSPKNPKKHCAEDEEDEQDEYEEDEELAIPASNALWSFRLSESRNFLNTPHPAQPHTPHPAQPHTPHPAQPHTLQLSRNDTNPGFAYTRSVWRNCFGSFNSNMNIGSSSYSPQIHYSSFLNNTNTIPYRFYGLDLNPYAAPQPQFPVIPSSSEVFSRSRVNANGN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1210 357 Gene3D WRKY domain 118 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu7g1210 357 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 77 270 IPR044810 GO:0003700
Pvu7g1210 357 MobiDBLite consensus disorder prediction 81 106 - -
Pvu7g1210 357 SMART WRKY_cls 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g1210 357 MobiDBLite consensus disorder prediction 183 206 - -
Pvu7g1210 357 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 77 270 - -
Pvu7g1210 357 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu7g1210 357 MobiDBLite consensus disorder prediction 183 218 - -
Pvu7g1210 357 MobiDBLite consensus disorder prediction 238 271 - -
Pvu7g1210 357 MobiDBLite consensus disorder prediction 245 259 - -
Pvu7g1210 357 Pfam WRKY DNA -binding domain 134 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu7g1210 357 ProSiteProfiles WRKY domain profile. 128 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1210 Pvu-Chr7 18951902 18954607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1210 95 196 WRKY Transcription Factor Family AT5G56270 53.922 2.31e-28 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu7g1210 WRKY 1.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1210 K18835 - vun:114191352 443.736