Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1182 ATGAATTGCTTCCCTTGTTGTGCCCCTAAGAAAAGCCTAAGCAAGAGGGAGCATGAGCCTCCACCACCCGAACCTGTACCAGTAAAAGCACCAGAAATGAAGAAACAAAAATCCGATGATCAAATGACAGTTGACCCAGAAAATATTAAGGTAAAGGCTTTTACGTTCCGTGAGCTAGCAACAGCAACAAAGAATTTCCGACAGGATTGCCTGTTGGATGAAGGAGGTTTCGGAAGACTATACAAAGGAATAATTCCTGCCACCGGCCAGATTGTGGCCGTGATGCAACTCGACCGAAATGGGATCGGTAAGGAATTTCTGGGTGATGTTGCGGAGCTAAGTATGTTGCAGCACGAAAATCTGGTGAATATCATTGGTTATTGTTCCGATGGAGATCAACGTCTTTTAGTTTACGAGTTGTTTGCTGGGCGCACTCTAGAAAACCGTCTTTTTGAGAATAAAGCGGATGAAGGGCCATTAAGCTGGTATGACAGAATGAAAGTAGTTGCGGGTGCTTCTAAAGGGCTAGAGTACTTGCACGAGAGTGCGGACCCCCCAATTATATTCAGGGACATGAAAGCGTCGAGCATCTTGGTGGACAATGAATTCAATGCTAAACTCCGTGATGTTGGAATGGCCAAGCTTTCTGGTGCTGACAAGATGAACAATGGACCTCCAAGACTTATGGGTACCTATGGTTACTGCGCTCCAGAGTACGTTAGAGCAGGTCAAGTCAGCATGAAATCAGATGTTTACAGTTTCGGAGTTATCTTGCTAGAGCTCATTACTGGACGAAGAGCCGTTGACACCACAAGACCAAATGAAGAGCAGAATCTAGTTGCATGGGCAACACCCTTATTCAGGGACCCAAAGAGATATCCAGACATGGCAGATCCGGTTCTTAATAAGAACTTCCCAGCAAAAGATCTGAATCAAGTTGTTGCAATAGCATCCATGTGCTTACAGGAGGAAGCAGAAGCCCGTCCTTTGATCAGTGACGTTGTAACTGCTCTCAGTTTTCTTTCCGCTGCTCCTGTTGCTGCACCCCGAAAGAGTAGTGCTGGTGAAAGCGATGGTGAAGCAGTATCTAGAAAGGGGAGCCGTAGATCATCAGTAGATAGCCAACATGGTTCTGATGGCCAACTTCCGCCAGCGATGTCCTCTAAACCTAGCCGCAAAAGCAGCAGCAGATCAAGGAAGGGAACAGATTCAGGAGATGGAAGCGTTTCTTCCAGCAGTGGGAAATCGCCGGGTGATTTAAGCCACAAGAGTAGCAAAAAATCTTCACTAAAACTGTTAAGCCAGAAGATAAGCGAAAAATCTTCTGAGGAAGATTTAAACCGGAAGAGCAGCAAAAAGTCCTCCACCAAAGATTTAAGCCAGAAGAAGAGCAGCAAAAAGTCTTCCATTTTGGGCCACAAGAGCAGTAAAAAATCTTCCAGCAGAGTTTCGAGCCACAAGAGTAGCAAAGATTCAGACGATGGAAGCATTTCCTCAAGCTGCCGTAGCAGCAGTGTGGCCTCAGATGATGATGTGTCAGAGCGTAGCAGCATTAGGCTCGCTGACTCCATTAACAACAGCAGAAGGACAGAGGATGGGATATTAGACCGTGAAAGCACCATGGAATCTGATGTGGGAAGTGGTCACCCTTTTGACCAAACTAGCAGCAGTGGATCAAGTGTTTATTCTCGATAA 1695 0.4596 MNCFPCCAPKKSLSKREHEPPPPEPVPVKAPEMKKQKSDDQMTVDPENIKVKAFTFRELATATKNFRQDCLLDEGGFGRLYKGIIPATGQIVAVMQLDRNGIGKEFLGDVAELSMLQHENLVNIIGYCSDGDQRLLVYELFAGRTLENRLFENKADEGPLSWYDRMKVVAGASKGLEYLHESADPPIIFRDMKASSILVDNEFNAKLRDVGMAKLSGADKMNNGPPRLMGTYGYCAPEYVRAGQVSMKSDVYSFGVILLELITGRRAVDTTRPNEEQNLVAWATPLFRDPKRYPDMADPVLNKNFPAKDLNQVVAIASMCLQEEAEARPLISDVVTALSFLSAAPVAAPRKSSAGESDGEAVSRKGSRRSSVDSQHGSDGQLPPAMSSKPSRKSSSRSRKGTDSGDGSVSSSSGKSPGDLSHKSSKKSSLKLLSQKISEKSSEEDLNRKSSKKSSTKDLSQKKSSKKSSILGHKSSKKSSSRVSSHKSSKDSDDGSISSSCRSSSVASDDDVSERSSIRLADSINNSRRTEDGILDRESTMESDVGSGHPFDQTSSSGSSVYSR* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1182 564 Gene3D Transferase(Phosphotransferase) domain 1 142 343 - -
Pvu7g1182 564 Pfam Protein kinase domain 72 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1182 564 SUPERFAMILY Protein kinase-like (PK-like) 44 341 IPR011009 -
Pvu7g1182 564 PANTHER OS07G0668900 PROTEIN 1 453 - -
Pvu7g1182 564 MobiDBLite consensus disorder prediction 357 372 - -
Pvu7g1182 564 Gene3D Phosphorylase Kinase; domain 1 28 140 - -
Pvu7g1182 564 MobiDBLite consensus disorder prediction 11 42 - -
Pvu7g1182 564 MobiDBLite consensus disorder prediction 346 564 - -
Pvu7g1182 564 PANTHER RECEPTOR-LIKE KINASE LIP1 1 453 - -
Pvu7g1182 564 MobiDBLite consensus disorder prediction 546 564 - -
Pvu7g1182 564 MobiDBLite consensus disorder prediction 525 543 - -
Pvu7g1182 564 MobiDBLite consensus disorder prediction 373 392 - -
Pvu7g1182 564 MobiDBLite consensus disorder prediction 401 419 - -
Pvu7g1182 564 ProSiteProfiles Protein kinase domain profile. 66 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1182 564 MobiDBLite consensus disorder prediction 437 464 - -
Pvu7g1182 564 MobiDBLite consensus disorder prediction 467 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1182 Pvu-Chr7 16919279 16922249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1182 1 345 Glycoside Hydrolase AT3G07070 55.096 8.88e-142 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pvu7g1182 Pkinase 2.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1182 - - pvu:PHAVU_007G115500g 894.419