Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1175 ATGGCAACTAGACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCAATGCCTATTGTTTAGTTGCTATTGGAGGTTCTGAAAACTTCTACAGTGCATTTGAGACTGAGTTAGCAGATATTATCCCTGTGATCAAGACCTCCATTGGTGGCACCCGTATTGTTGGTCGTCTTTGTGTTGGAAACAAGAATGGCCTTCTCTTGCCCCATACCACCACAGACCAAGAGCTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGTATAGAAGAAAGATTATCTGCATTGGGAAATTGTATAGCATGTAATGACCATGTGGCTCTCACCCATACTGATCTTGACAAGGAAACTGAGGAGATGGTCGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACTATTGCGGGTAATATTCTTGTTGGCAGTTACTGTGCATTCTCCAACAGGGGTGGTTTGGTCCACCCTCATACTTCCATTGAAGACTTGGATGAACTTTCTACCCTTCTTCAGGTTCCTTTAGTTGCTGGGACTGTCAATCGTGGTAGTGAAGTGATAGCTGCTGGTATGACAGTAAATGATTGGACAGCATTTTGTGGTTCAGACACCACAGCAACCGAGCTCTCTGTGATTGAGAGTGTTTTTAAGCTGAGAGAAGCTCAACCTAGTGCCATTGTCGATGAGATGAGGAAATCACTCGTTGATACTTACGTCTAA 738 0.4295 MATRLQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFETELADIIPVIKTSIGGTRIVGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDKETEEMVADVLGVEVFRQTIAGNILVGSYCAFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIESVFKLREAQPSAIVDEMRKSLVDTYV* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1175 245 Hamap Translation initiation factor 6 [eif6]. 1 245 IPR002769 GO:0042256|GO:0043022
Pvu7g1175 245 SMART eIF6neu2 3 204 IPR002769 GO:0042256|GO:0043022
Pvu7g1175 245 TIGRFAM eIF-6: putative translation initiation factor eIF-6 4 224 IPR002769 GO:0042256|GO:0043022
Pvu7g1175 245 PIRSF Transl_init_IF-6 1 226 IPR002769 GO:0042256|GO:0043022
Pvu7g1175 245 CDD IF6 2 223 IPR002769 GO:0042256|GO:0043022
Pvu7g1175 245 Pfam eIF-6 family 4 203 IPR002769 GO:0042256|GO:0043022
Pvu7g1175 245 SUPERFAMILY Pentein 1 224 - -
Pvu7g1175 245 Gene3D - 1 225 - -
Pvu7g1175 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 IPR002769 GO:0042256|GO:0043022
Pvu7g1175 245 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1175 Pvu-Chr7 15680395 15684525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1175 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 91.020 1.79e-174 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1175 K03264 - gmx:100777602 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1411 4 41142838 41146134 Pvu7g1175 7 15680395 15684525 PCT