Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1171 ATGCGGGCCCAGGCAGACAACCACCGCACTGAATACTCCTTCACCGTCGGCGAGTGGGTGTGGCTTCGTCTGCAACCGCACCGTCAACACTCTGTTGAACGGCGCCACTCACCCAAGCTCGCTCCTCGTTTTTCAGGCCCCTACAAGATCGCGCGTCACATAGGACATGTGGCCTACGAGCTCATACTTCCCTCATCATCACACATCCACCCTGTGTTTCACGTCTCTCTTCTCCGTCAGTTCAAAGGGGTATCTCAAGAGAGTTCATCTACTTCAAGTACGAACCCCACACCTCTTCTGAACTTACCTCCTTTCGCAAACCCTAATAACCCTCCGACAGCACCGCTTGAACTACCCACTCCGCACACGCCACCTGAGAACGCATTTACGAAGACGCATGTGACTTGGTCTCCCGCGACCGCTCCACTTCCCACGTCACCCAACCTCCAGAACATTCCAAGCATTGGTGACACCCTTTCAAACCCTAATCGTGGCCCAATGTTCCAAGGAGGCCCAATAGACAACCGTGCACTTTCAAACTTTGAGGACAAAGTTGAGTCTTCTAACTCTAAAACCCTTGCCACGTCTTCCGCAACGAACATCTCTATTCCAATGGCTTCTACGGCTTCCAGGCGTTTGAGGGCATTCAAGCGGTGGATGCAGTCCAAGGGTTTCCAGTGGAGCGATGCATTGGAGTTTGTGGATACACCCGAAGAGGGAATAGCGGTGAGAGCTCTTTGCCAGTTGAAGGAAGGTGATGTTGTGGCCGAAATGCCAAAAGAAGCTTGCCTCACCACCAAGACTAGTGGGGCACGTGAGATCATTGAAGATGCTGGTTTGGATGGTCATTTGGGGCTAGCATTTGCGATCATGTATGAGAGAAGCTTGGGTGGGGACTCACCTTGGTATGGATACCTTCAACTCTTGCCTTACCAAGAGTGCGTTCCAATTGTTTGGACCCTCGATGAAGTAAACGAGCTTTTGTGTGGTACTGAGCTTCACCAGACAGAGCAAGAAGACAAGGCTCTGATTTACGAGGACTGGAAAGAGAATATTCTTCCCCTGTTGGATTTAGCACCTTTAAAACTAAACCCAAAATTCTTTGACATAGAACAATACTTTGCAGCGAAAAGTCTTATATCTTCACGATCTTTTGAGATTGATGATTACCATGGTTTTGGGATGGTTCCCTTGGCAGATCTATTCAATCATAAAACAGGTGCAGAGGATGTGCATTTCACTGCTATGCCCTCTAATTATGAATCAGGAAGTGATGTAGATGGTAGTGATAATGATAAGAGCATTGTTAAGGAAGAAGTAGCATTTGATCAAATTCCCTCTATAGATATGACTGCGTCAATTGGTGCAAATGTTGGTAACTGCGTTGGTAGTGATTTGGATAGTTCTTCTGTTAGCGAGGATGATACTTCTATGTTGGAGATGATTATGATAAAAGATGTCGACAGTGGAACTGAGGTATTTAATACTTATGGGCTATTGGGTAATGCTGCTTTGCTTCATAGATATGGATTTACCGAGCCAGATAATTCCTATGATATTGTAAACATAGACATGGAGCTGATACTTCAATGGTGTTCTTCAGCTTTTTCGGACCGCCACAGTAGAGCAAGAGTTTCCCTTTGGAAAAGGTTAGGCTATTCTGCATGTGGCAGCCAAGAGTCTGAATATTTTGAGATCTCATTTGATGGAAAACCACAAATTGAACTCCTCATTTTATTACACATCATGTTATTGCTAGATGATGCTTACCAAAAGTTAGACCTATCGGCATCAGTTGCTGGGAATTGTCCTGAATCAAATGGTGAAACCACCCATCTTAATGGTAATATGTTTCCTAATGAAGCATTTAATATGAGCAAGAAATCCTTGCTGCCTAAAAGGGTTTGTGATGCCCTGTTGTCAATTGCGGACATGAGGGAGAGTCTCTATGGTTTGAATTCAGTTGAAGATGATATTGAAGCATTGGAAAGGTGTAGTTTAACTAGGGAGAGAAAACTGTATCATTCTTTGGTGCTGCGCATCAATGAAAGGAAGATTCTTCAGAAGCTCAGAAATTATGCTTCACAGCCAAATAAAATCAATAAGCACAGTTCACCAAGGAAGAAATTGAAAAGGACAACAAAGAAAACGACTTGA 2157 0.4465 MRAQADNHRTEYSFTVGEWVWLRLQPHRQHSVERRHSPKLAPRFSGPYKIARHIGHVAYELILPSSSHIHPVFHVSLLRQFKGVSQESSSTSSTNPTPLLNLPPFANPNNPPTAPLELPTPHTPPENAFTKTHVTWSPATAPLPTSPNLQNIPSIGDTLSNPNRGPMFQGGPIDNRALSNFEDKVESSNSKTLATSSATNISIPMASTASRRLRAFKRWMQSKGFQWSDALEFVDTPEEGIAVRALCQLKEGDVVAEMPKEACLTTKTSGAREIIEDAGLDGHLGLAFAIMYERSLGGDSPWYGYLQLLPYQECVPIVWTLDEVNELLCGTELHQTEQEDKALIYEDWKENILPLLDLAPLKLNPKFFDIEQYFAAKSLISSRSFEIDDYHGFGMVPLADLFNHKTGAEDVHFTAMPSNYESGSDVDGSDNDKSIVKEEVAFDQIPSIDMTASIGANVGNCVGSDLDSSSVSEDDTSMLEMIMIKDVDSGTEVFNTYGLLGNAALLHRYGFTEPDNSYDIVNIDMELILQWCSSAFSDRHSRARVSLWKRLGYSACGSQESEYFEISFDGKPQIELLILLHIMLLLDDAYQKLDLSASVAGNCPESNGETTHLNGNMFPNEAFNMSKKSLLPKRVCDALLSIADMRESLYGLNSVEDDIEALERCSLTRERKLYHSLVLRINERKILQKLRNYASQPNKINKHSSPRKKLKRTTKKTT* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1171 718 MobiDBLite consensus disorder prediction 87 176 - -
Pvu7g1171 718 CDD SET_LSMT 230 512 - -
Pvu7g1171 718 Gene3D - 514 706 IPR036464 -
Pvu7g1171 718 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 210 701 - -
Pvu7g1171 718 MobiDBLite consensus disorder prediction 695 718 - -
Pvu7g1171 718 Gene3D set domain protein methyltransferase, domain 1 209 511 - -
Pvu7g1171 718 MobiDBLite consensus disorder prediction 125 165 - -
Pvu7g1171 718 SUPERFAMILY SET domain 475 517 IPR046341 -
Pvu7g1171 718 ProSiteProfiles SET domain profile. 229 498 IPR001214 GO:0005515
Pvu7g1171 718 Pfam SET domain 240 498 IPR001214 GO:0005515
Pvu7g1171 718 SUPERFAMILY SET domain 210 411 IPR046341 -
Pvu7g1171 718 MobiDBLite consensus disorder prediction 702 718 - -
Pvu7g1171 718 MobiDBLite consensus disorder prediction 101 122 - -
Pvu7g1171 718 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 210 701 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1171 210 715 NAC Transcription Factor Family AT3G56570 53.818 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu7g1171 SET 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1171 K05302 - pvu:PHAVU_007G114400g 1332.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1171 7 15506060 15510111 Pvu7g1171 7 15506060 15510111 ECH