Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1157 ATGGCTTCTCTGGCGGCTTCCACCGTGGCTATGTCAGAAATGCTTGGAAACCCCGTGAGCCTCAGAGGCGCTACCAGATCTGCTCCATCACCATCTACATCTGCTACCTTCAAGACTGTTGCTCTTTTCTCCAAGAAGGCAGCGCCACCTTCTAAGAAAAAGGCAGCTGCTGTGTCCCCCGCCAACGAGGAACTCGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCAGAGATTCCCGAGTACTTGACAGGAGAAGTGCCTGGAGATTATGGTTATGACCCGTTTGGTCTTAGCAAGAAGCCAGAGGACTTTGCCAAATACCAGGCGTTTGAGTTGATCCATGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTTAACAAATACGGAGCTAACTGTGGTCCTGAGGCCGTTTGGTTCAAGACTGGAGCTTTGCTTCTTGATGGGGGTACGTTGAACTACTTCGGGAAAGCTATCCCCATCAATCTTATTGTTGCTGTTATTGCTGAGATAGTTCTTCTGGGTGGTGCTGAGTACTACAGAATTACCAATGGCCTGGATTTCGAAGACAAGCTTCACCCAGGTGGTCCATTCGACCCATTGGGGCTAGCAAAGGATCCAGACCAAGCTGCACTTCTAAAGGTGAAGGAAATTAAGAATGGTAGACTTGCTATGTTTGCAATGCTTGGTTTCTACTTCCAAGCTTATGTCACTGGTGAAGGTCCGGTTGAGAACTTAGCAAAACATCTTAGTGATCCTTTTGGTAACAACTTGCTCACTGTGCTTGCTGGGTCAGCTGAGAGGGTTCCAACTCTGTAA 861 0.489 MASLAASTVAMSEMLGNPVSLRGATRSAPSPSTSATFKTVALFSKKAAPPSKKKAAAVSPANEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKAIPINLIVAVIAEIVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVLAGSAERVPTL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1157 286 Pfam Chlorophyll A-B binding protein 88 249 IPR022796 -
Pvu7g1157 286 Gene3D Chlorophyll a/b binding protein domain 75 286 - -
Pvu7g1157 286 SUPERFAMILY Chlorophyll a-b binding protein 67 277 - -
Pvu7g1157 286 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 286 IPR001344 GO:0009765|GO:0016020
Pvu7g1157 286 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1157 Pvu-Chr7 14833099 14835599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1157 7 286 Chloroplast and Mitochondria Gene Families AT4G10340 81.495 1.49e-154 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1157 K08916 - gmx:100817348 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1157 7 14833099 14835599 Pvu7g1157 7 14833099 14835599 ECH
Pvu4g1357 4 40404463 40406992 Pvu7g1157 7 14833099 14835599 PCT