Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1154 ATGAGGATATTTGGAGCAATTGGTAGTGGTGCCAGTAGTGTTGTGCAGAGAGCCATGCATATACCAACACATAGGATTCTGGCGCTGAAGAAGATCAATATGTTTGAGAAGGAGAAAAGGCAGCAGCTCCTTACTGAGATAAGGACATTGTGTGAAGCACCTTGTTATGAGGGTCTTGTAGAATTTCATGGAGCATTTTACACCCCAGATTCTGGACAGATAAGCATAGCTTTGGAGTATATGGATGGAGGATCACTTGCAGATATCTTGCGAATGAATAGAAGGATACCTGAATTGAACCTATTCTATCGGAGAGCCAAAATGACTGATTTTGGTATTAGTGCTGGCTTAGAGAATTCAGTGGCAATGTGTGCTACATTTGTTGGAACTGTTACATACATGTCACCTGAGAGGATTCGAAATGAAAGCTATTCTTATCCGGCCGATATTTGGAGCCTTTGTCTTGCCCTTCTAGAGTGTGGAACTGGAGAATTCCCATATACAGTTAATGAAGGTCCTGTGAATCTTATGTTGCAGATCCTAGATGATCCATCACCATCACCATCAAAAAACAAATTTTCACCAGAATTCTGCTCCTTTGTTGATGCTTGTCTGCAAAAGGATCCAGACAATAGGCCAACAGCAGAGCAGCTGCTTTTGAACCCTTTTATCACAAAGTATGAGAATGAAAAGGTAGATTTAGCCGGATTTGTTCGAAGCGTTTTTTATCCTACACAAAGAATGAAGGACTTGGCAGAC 759 0.4137 MRIFGAIGSGASSVVQRAMHIPTHRILALKKINMFEKEKRQQLLTEIRTLCEAPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRMNRRIPELNLFYRRAKMTDFGISAGLENSVAMCATFVGTVTYMSPERIRNESYSYPADIWSLCLALLECGTGEFPYTVNEGPVNLMLQILDDPSPSPSKNKFSPEFCSFVDACLQKDPDNRPTAEQLLLNPFITKYENEKVDLAGFVRSVFYPTQRMKDLAD 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1154 253 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 1 98 - -
Pvu7g1154 253 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 106 252 - -
Pvu7g1154 253 ProSitePatterns Protein kinases ATP-binding region signature. 7 30 IPR017441 GO:0005524
Pvu7g1154 253 Pfam Protein kinase domain 105 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1154 253 Pfam Protein kinase domain 5 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1154 253 Gene3D Transferase(Phosphotransferase) domain 1 99 251 - -
Pvu7g1154 253 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1154 253 PANTHER - 1 98 - -
Pvu7g1154 253 PANTHER - 106 252 - -
Pvu7g1154 253 SUPERFAMILY Protein kinase-like (PK-like) 3 232 IPR011009 -
Pvu7g1154 253 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1154 Pvu-Chr7 14665196 14667460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1154 1 253 MAP Kinase Kinase Gene Family AT5G40440 73.077 1.66e-152 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pvu7g1154 Pkinase 2.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1154 K20607 - pvu:PHAVU_007G112700g 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1154 7 14665196 14667460 Pvu7g1154 7 14665196 14667460 ECH