Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1153 ATGAAGGTAAAGTTCAAAATTATACTAGTATTTTGTTTGTTAACAATATTTTTTGGTGTGCAATTGAAGTGTGCAGAGAGTAGTGTTCCTTTTTTTCCCACCAAAGAAACAGTTGATATAACCAATCATTTAGACATGAGATATTTGGCTGTTCAGTGTAAAGACAAAAACAATGATCTTGGGGTGCACCAACTGAATGTTGGCCAAACATTTAGTTTTACGTTCTTTCCGAAGGTTTTTTTCCCTTCAACCTTGTACTTTTGTCATTTTGTATGGTTGGAAGGAGATCATTATTTTGACATATATGTCCAAGATCGAGATGGATACTGTCAAAAAAATTCATGTTCTTGGGACATAATTGCAAATGGACCATGTAGAACGATATCGGGACATCGAGAGTGCTACAACTGGAATCCACCTGCAGAAGGAAAAAGATTGTTTATGCAACAAAGTAATAACACTTTACATGTATAA 474 0.346 MKVKFKIILVFCLLTIFFGVQLKCAESSVPFFPTKETVDITNHLDMRYLAVQCKDKNNDLGVHQLNVGQTFSFTFFPKVFFPSTLYFCHFVWLEGDHYFDIYVQDRDGYCQKNSCSWDIIANGPCRTISGHRECYNWNPPAEGKRLFMQQSNNTLHV* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1153 157 PANTHER S-PROTEIN HOMOLOG 18-RELATED 16 137 - -
Pvu7g1153 157 PANTHER - 16 137 IPR010264 -
Pvu7g1153 157 Pfam Plant self-incompatibility protein S1 37 137 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1153 Pvu-Chr7 14651123 14651596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1153 39 126 Carbohydrate Esterase AT3G16970 44.086 5.27e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1153 - - pvu:PHAVU_004G010300g 220.705