Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1143 ATGGAGGGAAGAGAGAGTTTTGGTGTCGTGGTGGGTGATGAAGCCCCGGAGAGCTTCCATGTGGCTCCTAGAATAATTGAGAACAACTTGGACTTTTCAAGGGCCGTCGTGCCGGTGCCTTCGCCGGCGACGGAGGGGAAAAAGAAGAGAGGGAGACCCAGGAAGTATGGGCCGGACGGGAAGGTGGCTATGGGGCCGGTGACGGCGCTTTCGCCGATGCCGATTTCTTCGTCGATTCCGTTGACCGGCGAGTTCTCCGCTTGGAAGAGAGGTAGAGGAAGGCCAGTTGAATCTATCAAAAAGTCATCCTTCAAGTTTGAGGTTGAAAGCCCTGTTCAAGGTGATGGAATAGCATACTCAGTTGGTGCCAATTTCACACCACATGTGCTCACAGTAAATGCTGGCGAGGATGTCACCATGAAAATCATGTCCTTCTCACAACAAGGATCACGTGCTATATGCATTCTCTCTGCAACTGGAACAATTTCAAATGTTACACTTCGTCAACCATCTTCTTGTGGAGGTACTTTAACATATGAGGGAAGGTTTGAAATTCTTTCCTTGTCTGGTTCCTTTATGCCAACTGAGAATGGAATTACAAGAAGCAGATCTGGTGGAATGAGTGTCTCTTTGGCCGGTCCAGATGGTAGAGTAATGGGGGGTGGACTTGCTGGTTTGCTGGTAGCTGCTGGTCCAGTTCAGGTTGTGGTGGGGAGCTTTCTTCCTGGTCACCAGTTGGAGCATAAAAACAAGAAGCAAAGGGTGGAGTTTATATCAACTATTACCCCTTCACCTGTTAATATCATCTCTAGTGAGGAACTAAAAGTCAGTTTTGGTGGAGTAAAGCCTATTATGACACCTGCTGCTTTTCAAGAAGAGAATATTGTTTCTTTTAACAATGGTCAAGACTCTAGGAACTCATCTGCTGATGACAAAGATCCTTTGCCCGACAAGGAGTCTAATCTAAGCCAATCAAAAGCTGAGGCTGCATGCTAA 996 0.4719 MEGRESFGVVVGDEAPESFHVAPRIIENNLDFSRAVVPVPSPATEGKKKRGRPRKYGPDGKVAMGPVTALSPMPISSSIPLTGEFSAWKRGRGRPVESIKKSSFKFEVESPVQGDGIAYSVGANFTPHVLTVNAGEDVTMKIMSFSQQGSRAICILSATGTISNVTLRQPSSCGGTLTYEGRFEILSLSGSFMPTENGITRSRSGGMSVSLAGPDGRVMGGGLAGLLVAAGPVQVVVGSFLPGHQLEHKNKKQRVEFISTITPSPVNIISSEELKVSFGGVKPIMTPAAFQEENIVSFNNGQDSRNSSADDKDPLPDKESNLSQSKAEAAC* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1143 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 319 IPR039605 GO:0003680
Pvu7g1143 331 SUPERFAMILY AF0104/ALDC/Ptd012-like 124 244 - -
Pvu7g1143 331 Gene3D - 127 258 - -
Pvu7g1143 331 ProSiteProfiles PPC domain profile profile. 122 264 IPR005175 -
Pvu7g1143 331 SMART AT_hook_2 47 59 IPR017956 GO:0003677
Pvu7g1143 331 SMART AT_hook_2 89 101 IPR017956 GO:0003677
Pvu7g1143 331 MobiDBLite consensus disorder prediction 37 62 - -
Pvu7g1143 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 9 319 - -
Pvu7g1143 331 MobiDBLite consensus disorder prediction 298 331 - -
Pvu7g1143 331 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 240 IPR005175 -
Pvu7g1143 331 CDD DUF296 126 240 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1143 Pvu-Chr7 14360489 14367811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1143 43 315 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 59.091 3.55e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1143 - - gmx:100776862 569.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1347 4 40275694 40281744 Pvu7g1143 7 14360489 14367811 ECH
Pvu7g1143 7 14360489 14367811 Pvu7g1143 7 14360489 14367811 ECH
Pvu4g1347 4 40275694 40281744 Pvu7g1143 7 14360489 14367811 PCT