Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1131 ATGGCTGGGCTGGAGCTCGTTCCCATAGGTACAATTTTGACAGTGGTAACTACACAAGTCTTGAGAACTGCTCAAGCAGCATCTGATGTTCTTATTGGTAAAGAAAGTTTCAAGGCCCTTTCAAAACATCTATTTGATATTGAGCCAGTGCTAAAGGAATTGCAGCTTCAAGAATTGAATGACTCTCAAGCCGCAAGGGTTGCTCTGGAGTCTCTTGAGAAAGATGTTAAGAAGGCAAATAGTTTGGTGGAAAAGTATGGGAACCGTGGCCGTTTTTACTTACTGATTAAGTGTCGAACCATTGTTGAGGAGGTTGAACAAGTCACAAGGGATATTGGGAAGTCTCTGGATGCATTGTCCATTGCAAATACTGAAGTCCTATCAAGAATTGCTGATCAGGTCAATAGATTGCAAAATGAGATGCAAAGGGTGGAGTTTGAGGCTTCCCAGTCCCAGATTCAAATTGTTGACAAGTTGAACCAGGGGCTTAGAGAACAGAAACTAGATCAGGCTTTTGCAAATGACATGTTAGAGGAGATAGCAAGGGCAGTTGGTGTGCCAGTGGAACCCTCGGAGATAAGCAAAGAGTTGGCTAGCATTAGGAAGGAAAAAGAAGAAGCTTCTTTAAGGAAAGAAAGAGCTGAATGTGTTCTTTTGGATCAGATCATTCAGTTACTCTCTCGAGCTGATGCAGCAAGAGTTTATGAAGAAGTAGAGAGGCAATACTTTGAAAGGGTTAAGGTGATAGAGAGATATGATTCAAGGGAAAAATATATCCCCCCACTCAATTCTTTCCATTGTTCTATAACTGGAGCTGTTATGGAAGATCCTGTCAGCCTTTGCACTGGTACTACATGTGAGAGACATGCTATTGAAGCTTGGCTTTACGATGGCAACAAGAAAGACCCAGAAACTAAAGAGGTTCTTGAAGATACTACCTTGAGGTCTAACATTCCTCTAAGACTATCTATCGAAGAGTGGAGAGAACTTAATTATTGTCTGATAATAAGGTCTATCAGGGAAAATTTATTATCATGTTCTGACCTGCAAGAATCCCTGACCCAAATGCAGACTCTTGTAAGAAAGAATTCTATTAACAAGGATTGGATTTCTATAGGAGACCTTACTGATATTGTTATATCTATCCTTGGGAGCTCTGATGACAAAGAAGTGAAGAGGAAGATTTTGATAACTTTGAAGGATGCTGTAGAGGGGAATACAAGAAACAAGGAGAAAGTGGTTGAATCTGAAGGATGGGATCACATTCTTTCCTGCTTAGGGAATGACTCTAACATTTCCAAGGCAGCAATTGATCTGCTATATGAATTGCTTCAAGAACAGTCTGATTGGAATCAATATCTCTGTAAAAAGCTTTCTAAAAATCACACTGCGGTTTGGTCCCTTGTTGCCCTTCTAAAGAATCCTGCCAGCCATTCTTCCGAAGTAGCAGAAAAGATTTTGAGGAAGCTTTTTGAACTAAACGAGGAAACAATTACTATTGCTGCTAATTTTGGCTGGTATAAACCACTTGTTGACCGCATGATTGAAGAACCAGATTCAAGAATATCAATGACAAAAGCCATTGTTAATTTGGAGTTGAATCATTCAAACTTGAAACTCCTTGGCAACGAAGGAGTTATACCTCCTTTGCTAGAAATGCTGTCGGGAAAAACTGAATCAAAAGACTTGTCATTGTTAGCCCTGATTAAATTAGCAGGATCTCATGCTAATAAAGGAATTATTGCTGCATCTGGAGGAGTTCCTCTTATTCTAGATTTAATGTTCTCTCCTCGGACACGGGCATTCATTATCATTAAATGCTCTGAAATCATTGAGAAGCTTTCTTCAGATGGTGATGGAATTGATTTCTTTGTTGATGGAGAGGGGAAACAACTTGAGTTAGATTCCATAATCACCAATGTGCTAGCTTTGCAGCAGAGTTCCAGCTTAGGTCCCAACATCCGAAAGCCTGCATTGCGTGCACTTCTTGGCATTTGCAAGTTTGAGACAGGTTTGGTTAAGAAAGCAATTCTTGCAGCCAATGGTGTATCTCTAATTCTTCCACTTCTTGATGATCCCGACTCAGAAATCAGAGAGACTTCCATAATTCTACTCTTTCTTTTCTCTCAACACGAGCCAGAAGGAGTAGTTGAATACCTCTTCAGGCCTAGAAGGCTTGAAGCCTTGATTGGATTTCTTGAGAATGAGGAGAATGATAATGTGCAGATGGCTGCTGCTGGTTTACTTGCTAACCTGCCAAAATCAGAACGAGAACTAACTATGAAGTTGATTGAGCTGGGTGGACTTGATGCAATCATAAGCATTTTGAAAACTGGCAAAATGGAAGCAAAAGAAAATGCTCTCAGTGCACTCTTCAGGTTCACAGACCCTACAAATATTGAGTCACAGCGAGATTTGGTTAAACGCGGAATATATCCTTTGCTTGTAGATTTTCTCAACACTGGTTCAGTCACAGCAAAGGCAAGAGCAGCAGCTTTCATTGGTGATCTTTCCATGAGCACTCCAAAGCTCACAGTTATTCCCAAGCCAACTGGGTGCTGGCTTTGCAGATCATCACGTGTCCCTTTGTGTCCAGCACATGGGAGTGTATGCAGTGTGAACAACACATTTTGTGTTTTGGAAGCTAAGGCTTTACCTGGCTTGATAAAGCTGTTACATGGGGAGGTTCATGCAACTGCTTATGAAGCAATACAGACACTTTCCACATTGGTTTTGGAAGACTTTCCTCAAAGGGGAGCTCGTGTCTTGCATGAGAATAATGCAATAAGATCCTTATTGGACATTTTGAACTGGGGAACTGAATCTCTCAAGGCAGAAGCTATAGGACTGTTAGAGAAGTTGTTTGTGTCAAAGGAAATGGTAGAATACTATGGAACAACAGCAAGATCACGTCTAATTGGTTTGACTGGCATGAATATATATGGAGATAATCACCTCAGGAGAAAGGCTGCCAAAGTGCTATCATTGCTTGAACGCTATTCAAAGTCATCATCTTCTGCGATCTCCGGAATTCTGGACTGA 3042 0.4089 MAGLELVPIGTILTVVTTQVLRTAQAASDVLIGKESFKALSKHLFDIEPVLKELQLQELNDSQAARVALESLEKDVKKANSLVEKYGNRGRFYLLIKCRTIVEEVEQVTRDIGKSLDALSIANTEVLSRIADQVNRLQNEMQRVEFEASQSQIQIVDKLNQGLREQKLDQAFANDMLEEIARAVGVPVEPSEISKELASIRKEKEEASLRKERAECVLLDQIIQLLSRADAARVYEEVERQYFERVKVIERYDSREKYIPPLNSFHCSITGAVMEDPVSLCTGTTCERHAIEAWLYDGNKKDPETKEVLEDTTLRSNIPLRLSIEEWRELNYCLIIRSIRENLLSCSDLQESLTQMQTLVRKNSINKDWISIGDLTDIVISILGSSDDKEVKRKILITLKDAVEGNTRNKEKVVESEGWDHILSCLGNDSNISKAAIDLLYELLQEQSDWNQYLCKKLSKNHTAVWSLVALLKNPASHSSEVAEKILRKLFELNEETITIAANFGWYKPLVDRMIEEPDSRISMTKAIVNLELNHSNLKLLGNEGVIPPLLEMLSGKTESKDLSLLALIKLAGSHANKGIIAASGGVPLILDLMFSPRTRAFIIIKCSEIIEKLSSDGDGIDFFVDGEGKQLELDSIITNVLALQQSSSLGPNIRKPALRALLGICKFETGLVKKAILAANGVSLILPLLDDPDSEIRETSIILLFLFSQHEPEGVVEYLFRPRRLEALIGFLENEENDNVQMAAAGLLANLPKSERELTMKLIELGGLDAIISILKTGKMEAKENALSALFRFTDPTNIESQRDLVKRGIYPLLVDFLNTGSVTAKARAAAFIGDLSMSTPKLTVIPKPTGCWLCRSSRVPLCPAHGSVCSVNNTFCVLEAKALPGLIKLLHGEVHATAYEAIQTLSTLVLEDFPQRGARVLHENNAIRSLLDILNWGTESLKAEAIGLLEKLFVSKEMVEYYGTTARSRLIGLTGMNIYGDNHLRRKAAKVLSLLERYSKSSSSAISGILD* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1131 1013 Gene3D - 515 846 IPR011989 -
Pvu7g1131 1013 ProSiteProfiles U-box domain profile. 260 334 IPR003613 GO:0004842|GO:0016567
Pvu7g1131 1013 SUPERFAMILY ARM repeat 352 713 IPR016024 -
Pvu7g1131 1013 SUPERFAMILY ARM repeat 649 1001 IPR016024 -
Pvu7g1131 1013 SMART Ubox_2 264 327 IPR003613 GO:0004842|GO:0016567
Pvu7g1131 1013 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 244 333 IPR013083 -
Pvu7g1131 1013 Gene3D - 349 503 IPR011989 -
Pvu7g1131 1013 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 6 1010 - -
Pvu7g1131 1013 Gene3D - 866 1013 IPR011989 -
Pvu7g1131 1013 Coils Coil 127 154 - -
Pvu7g1131 1013 SUPERFAMILY RING/U-box 249 330 - -
Pvu7g1131 1013 SMART arm_5 916 956 IPR000225 GO:0005515
Pvu7g1131 1013 SMART arm_5 872 912 IPR000225 GO:0005515
Pvu7g1131 1013 SMART arm_5 712 754 IPR000225 GO:0005515
Pvu7g1131 1013 SMART arm_5 756 796 IPR000225 GO:0005515
Pvu7g1131 1013 SMART arm_5 406 445 IPR000225 GO:0005515
Pvu7g1131 1013 SMART arm_5 799 839 IPR000225 GO:0005515
Pvu7g1131 1013 SMART arm_5 534 573 IPR000225 GO:0005515
Pvu7g1131 1013 SMART arm_5 574 616 IPR000225 GO:0005515
Pvu7g1131 1013 SMART arm_5 670 710 IPR000225 GO:0005515
Pvu7g1131 1013 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 6 1010 - -
Pvu7g1131 1013 Coils Coil 62 89 - -
Pvu7g1131 1013 Gene3D - 6 124 IPR036537 GO:0007166
Pvu7g1131 1013 Pfam U-box domain 264 329 IPR003613 GO:0004842|GO:0016567
Pvu7g1131 1013 Coils Coil 197 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1131 Pvu-Chr7 14045348 14049992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1131 264 968 U-box Gene Family AT1G20780 27.719 4.49e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1131 - - gmx:100783638 1713.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1131 7 14045348 14049992 Pvu7g1131 7 14045348 14049992 ECH