Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1122 ATGAAGAGTGAAAAAGTTGTTGTCCCAGCTGAGCCAGCTACTTCCATTCCAGGTGAGGCCATGGAAATCATGACTGCCTTTCAACTAGTTCTAAAAAAATCTCTGGCTTTTGGCAGTCTTACACGAGGCCTTCACGAGGCTGCAAAAGTGATTAAGAAGCATGTTGCACAACTCTGTGCCATTTGTGTAGAGCATAATGTTAGCCTTTTCATTGTTCCTAGTGCAAAGACCTTGGGTGAGTGGGCTGGTTTGTGTAAGATTGATTCCGAAGAAAAAGCTAGGTAG 285 0.4386 MKSEKVVVPAEPATSIPGEAMEIMTAFQLVLKKSLAFGSLTRGLHEAAKVIKKHVAQLCAICVEHNVSLFIVPSAKTLGEWAGLCKIDSEEKAR* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1122 94 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 60 89 IPR004038 -
Pvu7g1122 94 PANTHER 40S RIBOSOMAL PROTEIN S12 1 94 - -
Pvu7g1122 94 Gene3D - 61 94 IPR029064 -
Pvu7g1122 94 PANTHER 40S RIBOSOMAL PROTEIN S12 1 94 IPR000530 GO:0003735|GO:0005840|GO:0006412
Pvu7g1122 94 Gene3D - 8 60 IPR029064 -
Pvu7g1122 94 SUPERFAMILY L30e-like 20 86 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1122 Pvu-Chr7 13792747 13794211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1122 16 94 Cytoplasmic Ribosomal Protein Gene Family AT1G15930 53.684 4.09e-28 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1122 K02951 - gmx:100305687 138.272