Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1121 ATGGCAACTATGCTGGGAAAGGAGCATCATCTCAACCTCAAGGAGACTGAGCTTTGCCTAGGTCTGCCTGGTGCTGGTGGTGGTGGTGGTTCTGGTGGTGGCGGCGGCTCTGAGGTGGAAACACCAAGGGCTACTGGGAAGAGAGGGTTCTCTGAGACAGTTGATCTGAAGCTTAATCTTCAGGCCAAGGAAGATCTCAACGAGAATCTGAAGAATGCCCCAGAGGAGAAGACTCTCCTTAAGGATCCTACCAAGCAACCTGCTAAAGCTCAAGTAGTTGGTTGGCCACCAGTGAGGTCATACAGAAAGAACATGATGACCCAGAAGGTTAGCACTGAGGATGGAGCTGAGAAGACAACAAGCAGCACTGCTTCTGGGGCATTTGTCAAAGTTTCCATGGATGGAGCACCTTACCTTCGCAAGGTGGACCTCACAATGTACAAAAGCTACAAAGACTTATCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACCATGGGTAATTATGGGGCCCAAGGAATGATAGACTTCATGAATGAGCGCAAGTTGATGGATCTTCTTAACAGCTCCGAGTATGTGCCAACCTATGAAGATAAGGATGGTGACTGGATGCTCGTGGGTGATGTCCCATGGGAGATGTTTGTTGAGTCATGCAAGCGTCTGCGAATAATGAAAGGATCAGAGGCAATTGGACTTGCGCCAAGAGCAATGGAAAAATGCAAAAGCAGAAGCTGA 735 0.4871 MATMLGKEHHLNLKETELCLGLPGAGGGGGSGGGGGSEVETPRATGKRGFSETVDLKLNLQAKEDLNENLKNAPEEKTLLKDPTKQPAKAQVVGWPPVRSYRKNMMTQKVSTEDGAEKTTSSTASGAFVKVSMDGAPYLRKVDLTMYKSYKDLSDALAKMFSSFTMGNYGAQGMIDFMNERKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKSRS* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1121 244 Coils Coil 53 73 - -
Pvu7g1121 244 Pfam AUX/IAA family 44 235 IPR033389 -
Pvu7g1121 244 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 6 237 IPR003311 GO:0005634|GO:0006355
Pvu7g1121 244 PANTHER AUXIN-RESPONSIVE PROTEIN IAA7 6 237 - -
Pvu7g1121 244 SUPERFAMILY CAD & PB1 domains 123 225 - -
Pvu7g1121 244 ProSiteProfiles PB1 domain profile. 126 226 IPR000270 GO:0005515
Pvu7g1121 244 MobiDBLite consensus disorder prediction 22 52 - -
Pvu7g1121 244 Gene3D - 121 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1121 Pvu-Chr7 13712216 13714810 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1121 111 234 B3 DNA Binding Superfamily AT4G23980 32.258 7.46e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pvu7g1121 AUX_IAA 1.2e-82 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1121 K14484 - gmx:100810762 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1121 7 13712216 13714810 Pvu7g1121 7 13712216 13714810 ECH