Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1104 ATGGATCATGTTATTGGTGGAAAATTCAAGCTCGGTAGGAAGATTGGGAGTGGATCGTTTGGAGAGCTTTACTTAGGTGTTAATGTACAAAGTGGAGAGGAAGTGGCTGTCAAGCTAGAACCTGTGAAGACCAAGCATCCCCAGCTTCACTATGAGTCTAAATTGTATATGCTTCTCCAAGGGGGAACTGGTATACCCCATCTAAAATGGTTTGGAAGTGAGGGTGACTACAATGTCATGGCTATTGACCTCCTTGGGCCAAGTCTTGAAGACTTGTTTAACTATTGTAATAGGAAATTATCTCTGAAAACAGTTCTGATGCTGGCAGATCAGCTAATAAACAGAGTTGAGTACATGCACTCCCGGGGTTTTCTGCATCGAGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGCCGGAAGGCAAATCAGGTATACATAATTGATTATGGCCTTGCAAAAAAGTACCGGGATCTTCAAACACATAAGCATATACCATACAGGGAAAACAAAAACCTCACTGGCACTGCTCGTTATGCAAGTGTTAATACTCATCTTGGAGTTGAGCAAAGCAGAAGAGATGATCTAGAATCTCTTGGTTATGTGCTCATGTATTTTTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAAAAGTATGACAAGATAAGTGAAAAGAAGATGCTTACTCCAATAGAGGTCCTATGCAAGTCCTATCCAATGGAATTTGCATCATACTTCCACTATTGCCGATCGTTGCGGTTTGAAGATAAGCCCGATTATTCTTATCTTAAGAGACTCTTTCGGGACCTATTCATCCGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACAATGTTGAAGTATCCACAAATTGGATCCAGCTCTAGAGCTCGACCAAGTGGGAAACCAGTCATAAACCCAGGGCAATCAGGAGAACGGCCTTCAGCGGTACCAGATATTCGAGATAGATTCTCTGGTGCAGTTGAGGCATTTGCGAGGAGGAATGGCTCAGGACTTGGTCTGCATGGTGATCATTCTAGGCATAGGTCTTCCGATGATGTCCCATCGTCGTCCAAAGATGTGCAACCTGATTCTGAGAGGCCTCGTAGTTCTTCTCGTAATGGCAGTTCTTCAAAAAAGCCTGTCTTGTCAAGCAGCCGACCAAGCTCTTCTGGCGAGCCCAGTGAAAGCCGCGTTAGCCGACTGGTCTCAAGCAGTGGCAGACTATCAACAACTCAGAGACTTCAAGCTGGTTCTGAGTCTAAAACATCTCTAACTCGGGCTTCAGGGACAAGACTTGGCCGTGACGATGCCCTCAGGAGCTTTGAACTCCTGTCACTTGGTACGGGAAAAAGGAAATGA 1383 0.4432 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGSEGDYNVMAIDLLGPSLEDLFNYCNRKLSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPMEFASYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTMLKYPQIGSSSRARPSGKPVINPGQSGERPSAVPDIRDRFSGAVEAFARRNGSGLGLHGDHSRHRSSDDVPSSSKDVQPDSERPRSSSRNGSSSKKPVLSSSRPSSSGEPSESRVSRLVSSSGRLSTTQRLQAGSESKTSLTRASGTRLGRDDALRSFELLSLGTGKRK* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1104 460 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1104 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pvu7g1104 460 SMART serkin_6 9 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1104 460 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pvu7g1104 460 MobiDBLite consensus disorder prediction 375 437 - -
Pvu7g1104 460 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Pvu7g1104 460 PANTHER CASEIN KINASE-RELATED 1 447 - -
Pvu7g1104 460 MobiDBLite consensus disorder prediction 342 460 - -
Pvu7g1104 460 MobiDBLite consensus disorder prediction 299 326 - -
Pvu7g1104 460 MobiDBLite consensus disorder prediction 347 374 - -
Pvu7g1104 460 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 447 - -
Pvu7g1104 460 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1104 460 Gene3D Transferase(Phosphotransferase) domain 1 1 320 - -
Pvu7g1104 460 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1104 Pvu-Chr7 13125704 13131249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1104 11 281 MAP Kinase Kinase Kinase AT1G62400 27.305 9.40e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pvu7g1104 Pkinase 1.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1104 K08960 - qsu:112030604 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1104 7 13125704 13131249 Pvu7g1104 7 13125704 13131249 ECH