Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1103 ATGGGGAAGAGAATTCCTGAGAAAGAGTATGCATTGCCGAGTAGAAATGGTAATAGTAGTCATCATACTCACCCAGGACGAGTTTGGGGAATTCTTCATGTCCTAAAGTACCACCATTGGCGTCAGGTGAAGAGAAGGCTTACACACAGAAGACATGATAGTGGAAGACATGATGAAAGAGCTGAAAGGCCGGGGACATCTGATGATTCTGGGCTTAACTTTATGCCAGAGCATTGTACGCCAGGTACAGAGTTATCTGATGTTGAAGAAAAGCTGGTACAGTCCTCTTCTCCAACCAAAAGTTCTATCAAATCCCGATTGAAGTCACTTCTCAGTGAAGATAAAAGGAAAGGTCGACACAAGAGAAGTTCGACTTGCCCTGCAAAGTCACAACTGCAACTAGCTCACGCTGATTCTGTTCACAACTTGGAGGTTGACCCACTTAGCGAATTGTTATTAACTGTTGAGACCCCTGAACCAGTTCTAAAAACCTTTCAGAACCATCTTGCAGCTGGCACACTGGATGTGTTATCACCAGTTTTCTCTGACAAACCAATTGCCAACATTGAAAAATGTGTAGATTGTGGCACAATGTTTTCTAGTGACAATTTGGAACAAAGCAAGATTCATAAGCACTTGACCTGTCCTAATCAAGGTGGCCCGGAAGAGAAGTTGTTCAATGCGAAGATACTTACAACTGATGCTTCACCCCATCTCTTCAAGGACTTTCTTGATGCATTGGATGTGATAAACGAAAACAAGAACTTTCTATTAGAATATATACAGGATCCAGGCTCTCCTTTGCCATTTCACACTCACAATCAACAATCTTTGAATGCTAATATGAGACGAGCCAGATCTCTTTCATTTCCTGTATCAGCCTCATCATCAGGAAAGAAAGATTCTGATCCAGGTCAACTCATAAACAAAATGATAGATGATCTGTTAATTGTAGAAAAAGAAAAGCTACAAACTCAAAGTAACATGCCAAATGAATCCATGCATGGCTCTTTGGAAGATTCTCACCAACAGTCCATACCATCGGGTTCTTCGCATAATTCCGATGAAGTAGGTGAAAGAGATTCTAATTCGTCATCAGTTTCACCCCAGGTTCCCAACAATGTGAGAACTAGGCATTTCAGGGATCTTAGAAAGAAGATGAGGCGCATAATTGAAGAGGGAAGAAATGAAAGGCATCGCATTACCATGGATGCTATACTTGACAAAATTCCTCGGGGAAAGAGGCTTACAAAAAATGTGAAGAAGTTGGTTCATGACATGTCCAAAGACAACACCGTCAATGGGGAAGGTGAAGAAAGTTCAACAAGTGGTTTTGGGAGCCGTCTCTCTTCTATGTCCTTCGACAAGCGTCAACGATCACCCATGAGGAATTCTTCTCTAAAAGAATCAATTGGAAGATATTCTCAGTTGTACGAGACTTGTTTTCATAGTGAAGCCAAGTATCCTCAGGTTGAAAACTCAAGAATGAAAGAAGAAGAGAGAAATTCTATATTGAAGACCCCAAAATCCTTCAAAAGGTTTCTTTCAATGCCTAATTTGAAATCTTACTTTCACCTGAATGAGGAGCCTTCTTTCCTTTTATCCCCCCAGAACTCAATGAAGAGATATGTAGATAGAAACATCAGCCCAAATGACATTGATCATCACCATTGGAGGTCTAACCATAGTGATGATTCAAAAAGTCAAAATTTTCCACCTACACTTCCTAATAACACAAATCAAGAAACCAGCTTGAATGCTGACCAAAAGCAACTGCTTGTCAGGAGTGCTTCAAAATCAGGAATAGAATTTAATACTGAGGAAAAGGAAGAAAAGATCATAGGAATTGAAGGTTTAGAAAACTTGAGAGACGGTGGACAAGACATTGGAGCCGAAACAGATACTTGCCCAGCGGAAGCTAACTCGGTCTTCTCTTCTGATACCAGCTTTCTTGACGTTTCATTTGATCTGGAGAACTTAGACATTCCCGAAGAAGAATTAAACTCAGAATTAAAGCAAGGGCAAGATGCTGGATTGGATCAAATGGCAGAGCAACAAAAGGCTGAAGAGGATCAACCGGAGGAGGGTGAAAATGTTCAAAACCTTGGAACTCTAAGCAGAAGCTTCAACTATGAAATTCCATGTATTGAGGTTGATCCAAGTAATGAAGCTGCATTTAATTATGTGAGAAAGGTTTTAGACCTCTCTGGTTTCACTGGCCATGATTCCCTAGGGATATGGTTTTCTGATAACCAACCAGTTGATCCTTCAGTATATGAAGAATTGGAAGGTTGCTTGCTTCTTGATCCAGATTGTTCTGGTAACAGAGGAGAAGGTGGAGAATGCAGTCACCTACTTCTGTTTGATATAGTGAATGAGGGATTGTTGGAGATTTTTGGAAGATCATACAACTATTATCCAAGACCTTTGTCTACTCTCTCCCGTGTTCATCCACTGCCAACAGGAGAAAAAGTTCTCTATAATGTGTGGAAACTTATTAGCTGGTATATGAACTCAACAATATTTGATCTTTACACATCATTGGATTATTATGTGAGCAAAGATCTATCAAAATATGATGGGTGGATGAATCTCCAATTTGATTCTGAATGTGTGGGGCTTGAGCTAGATGACTTGATTTTTGATGATCTTTTGGAGGAAATGATATTCACCCAATTAACCTAG 2685 0.4015 MGKRIPEKEYALPSRNGNSSHHTHPGRVWGILHVLKYHHWRQVKRRLTHRRHDSGRHDERAERPGTSDDSGLNFMPEHCTPGTELSDVEEKLVQSSSPTKSSIKSRLKSLLSEDKRKGRHKRSSTCPAKSQLQLAHADSVHNLEVDPLSELLLTVETPEPVLKTFQNHLAAGTLDVLSPVFSDKPIANIEKCVDCGTMFSSDNLEQSKIHKHLTCPNQGGPEEKLFNAKILTTDASPHLFKDFLDALDVINENKNFLLEYIQDPGSPLPFHTHNQQSLNANMRRARSLSFPVSASSSGKKDSDPGQLINKMIDDLLIVEKEKLQTQSNMPNESMHGSLEDSHQQSIPSGSSHNSDEVGERDSNSSSVSPQVPNNVRTRHFRDLRKKMRRIIEEGRNERHRITMDAILDKIPRGKRLTKNVKKLVHDMSKDNTVNGEGEESSTSGFGSRLSSMSFDKRQRSPMRNSSLKESIGRYSQLYETCFHSEAKYPQVENSRMKEEERNSILKTPKSFKRFLSMPNLKSYFHLNEEPSFLLSPQNSMKRYVDRNISPNDIDHHHWRSNHSDDSKSQNFPPTLPNNTNQETSLNADQKQLLVRSASKSGIEFNTEEKEEKIIGIEGLENLRDGGQDIGAETDTCPAEANSVFSSDTSFLDVSFDLENLDIPEEELNSELKQGQDAGLDQMAEQQKAEEDQPEEGENVQNLGTLSRSFNYEIPCIEVDPSNEAAFNYVRKVLDLSGFTGHDSLGIWFSDNQPVDPSVYEELEGCLLLDPDCSGNRGEGGECSHLLLFDIVNEGLLEIFGRSYNYYPRPLSTLSRVHPLPTGEKVLYNVWKLISWYMNSTIFDLYTSLDYYVSKDLSKYDGWMNLQFDSECVGLELDDLIFDDLLEEMIFTQLT* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1103 894 MobiDBLite consensus disorder prediction 324 381 - -
Pvu7g1103 894 Pfam Protein of unknown function (DUF3741) 223 266 IPR022212 -
Pvu7g1103 894 MobiDBLite consensus disorder prediction 565 587 - -
Pvu7g1103 894 PANTHER PROTEIN TRM32 1 891 IPR044257 -
Pvu7g1103 894 PANTHER TRM32-LIKE PROTEIN (DUF3741) 1 891 - -
Pvu7g1103 894 MobiDBLite consensus disorder prediction 428 468 - -
Pvu7g1103 894 MobiDBLite consensus disorder prediction 434 468 - -
Pvu7g1103 894 MobiDBLite consensus disorder prediction 89 106 - -
Pvu7g1103 894 MobiDBLite consensus disorder prediction 46 130 - -
Pvu7g1103 894 MobiDBLite consensus disorder prediction 360 375 - -
Pvu7g1103 894 MobiDBLite consensus disorder prediction 52 66 - -
Pvu7g1103 894 MobiDBLite consensus disorder prediction 1 24 - -
Pvu7g1103 894 MobiDBLite consensus disorder prediction 324 353 - -
Pvu7g1103 894 MobiDBLite consensus disorder prediction 670 703 - -
Pvu7g1103 894 MobiDBLite consensus disorder prediction 554 587 - -
Pvu7g1103 894 Pfam Domain of unknown function (DUF4378) 726 887 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1103 Pvu-Chr7 13117941 13122938 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1103 704 881 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 50.549 8.35e-57 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1103 - - var:108319201 1286.55