Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1101 ATGGCCGACGACTTCGAATTTGCTGACAAAGTCCCTCCATCCTTCGATAGCGTGGGAAATGCTTCAAAAGGGTTCAACCCAGGATTAATTGTTCTCCTGCTTGTTGGTGGGTTGATGTTGATATTCTTGGTTGGAAATTTTGTACTCTACACCTATGCACAGAAGACTCTCCCTCCCAGAAGAAAGAAGCCAGTTTCAAAGAAGAAGATGAAGAAGGAGAGACTGAAGCAGGGCGTCTCTGCACCTGGAGAGTAG 255 0.4627 MADDFEFADKVPPSFDSVGNASKGFNPGLIVLLLVGGLMLIFLVGNFVLYTYAQKTLPPRRKKPVSKKKMKKERLKQGVSAPGE* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1101 84 PANTHER DNA-BINDING PROTEIN S1FA2 3 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pvu7g1101 84 Pfam DNA binding protein S1FA 21 84 IPR006779 GO:0003677|GO:0005634|GO:0006355
Pvu7g1101 84 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 84 - -
Pvu7g1101 84 MobiDBLite consensus disorder prediction 59 84 - -
Pvu7g1101 84 MobiDBLite consensus disorder prediction 1 21 - -
Pvu7g1101 84 MobiDBLite consensus disorder prediction 60 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1101 Pvu-Chr7 13003360 13005952 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Pvu7g1101 S1FA 2.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1101 - - gmx:100499820 125.176