Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1099 ATGGCTTCCCAGAACCCAGCGGAAGAAGAAAACTCAAAGCGAAATTGGTCCCTCCAAGACTTCGAGATCGGTAAACCTCTGGGAAGGGGCAAATTTGGCAGAGTTTATGTTGCCAGAGAAGTCAAGAGCAAATTTGTTGTGGCGTTGAAGGTTATATTTAAGGAACAAATTGATAAGTACAGAATTAATCACCAACTGAGGAGAGAGATGGAGATACAGACCAGTCTTCGGCACCCTAACATCCTGCGTCTTTATGGTTGGTTTCATGACACTGAACGTGTTTTCTTGATTCTCGAGTATGCTCATAAGGGTGAGCTTTACAAAGAGATGAGGAAAAAGGGTCATTTTACAGAGAAGCAAGCTGCCACGTATATTTTGAGCCTCACAAAGGCATTGGCTTATTGCCACGAGAAGCATGTTATTCATAGGGATATCAAGCCTGAAAATTTGTTGCTGGATCACGAGGGTCGTCTTAAAATTGGAGATTTTGGTTGGTCTGTTCAGTCTAAAAGCAAAAGACATACCATGTGTGGCACATTGGATTATTTAGCACCAGAAATGGTTGAAAATAAAGCTCATGACTATGCAGTTGATAACTGGACTCTTGGTATCCTTTGTTATGAGTTCCTCTTTGGTGCCCCTCCGTTTGAGGCTGAGAGTCAAGCTGATACCTTCAAAAGGATAATGAAGGTTGACCTAAGCTTCCCTTCCAAACCTTCTATTTCTTTAGATGCCAAAAGTCTGATTAGCCGGCTTCTGGTGAAAGACTCCTCACGAAGGCTCTCTCTTCAGAAGATAATGGAGCATCCCTGGATAATCAAGAATGCAGATCTTACGGGTACCTGCTAG 849 0.4276 MASQNPAEEENSKRNWSLQDFEIGKPLGRGKFGRVYVAREVKSKFVVALKVIFKEQIDKYRINHQLRREMEIQTSLRHPNILRLYGWFHDTERVFLILEYAHKGELYKEMRKKGHFTEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIGDFGWSVQSKSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLFGAPPFEAESQADTFKRIMKVDLSFPSKPSISLDAKSLISRLLVKDSSRRLSLQKIMEHPWIIKNADLTGTC* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1099 282 SMART serkin_6 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1099 282 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 5 278 IPR030616 GO:0004672
Pvu7g1099 282 ProSiteProfiles Protein kinase domain profile. 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1099 282 Pfam Protein kinase domain 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g1099 282 PIRSF ILK 1 275 - -
Pvu7g1099 282 CDD STKc_Aurora 20 272 - -
Pvu7g1099 282 Gene3D Transferase(Phosphotransferase) domain 1 105 279 - -
Pvu7g1099 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Pvu7g1099 282 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Pvu7g1099 282 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
Pvu7g1099 282 SUPERFAMILY Protein kinase-like (PK-like) 15 275 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1099 Pvu-Chr7 12931933 12935353 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1099 21 275 CBL-interacting serine-threonine protein kinases AT5G10930 40.458 1.36e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Pvu7g1099 Pkinase 5.8e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1099 K08850 - gmx:100800111 543.888