Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1084 ATGGATGTGCCCAAGCACCGTGCCACTCGAACAACCTCTCTCCGGGATGCCTCTGACTCCTCCAAGATGGAAGGCACCGGAAGCTGGGACGCCATCGAATGGACCAAAATTGAGCCAATTGCGCGCTTCGTCTCGCATGCGAATCTCGATTTCTTGATCGAGGCGGAGCAAGTTGTCGCCGAAGGACATGGTGTTGTTCTTGTTAATACGGATGATGCTGGCACATTGATGGTAACGAATTTCCGTCTTATTTTTCTGAGTGAGGGCACTAGAAAAGTTATTTCCCTTGGAACGATACCACTAGCAACCATTGAGAAGTTTAACAAGATGGTTGTAAAGGTTCAGTCAAATAGTCGTCATGTAGACAAGACACCAGCACAGAGACTGCTTCAGGTGATTGGAAAAGATATGAGAATTATAGTCTTCAGTTTCAGACCACGTACAAAACAGAGACGTGTGGTATTTGATGCGCTATTGAGGTGTACAAAGCCCGCAAGATTATGGGATCTTTATGCTTTTGCATCAGGACCTTCTAGGTTTAACAACACTACTCCACTGGTCCGTTTACTGGATGAATATTCTCGGCTTCTTTGCCTAGGTTCTTTTTGTGCATCAATCGATATAATTGAAAATGGGTCATACACGTTGTCAAATGACCTATGGAGAATAAGTAGTGTGAATTCCAATTATACAATGTGCCAGAGTTATCCATTTGCTTTCATTGTTCCAAAGATCATTAGTGATGATGAAGTACTCCAGGCATGCAGCTTCCGTGCAAGATGTCGACTACCTGTAGTTTCATGGTGCCATCCTTTGACTGGAGCAGTTGTTGCACGATCTTCTCAACCCTTAGTTGGTCTTATGATGAACATGAGGAGCAACATGGATGAAAAACTTGTGGCTGCACTCTGTAGCAAACTAGATAATGGCTCAAGAAGAAAGTTGTATATTGTTGATGCACGGCCAAGAAAAAACGCATTGGCTAATGGAGCCATGGGAGGTGGTTCAGAGTCATCATCAAACTATTTTCAATCTGAGGTAGTCTTTTTGGGGATAGACAACATCCATGCGATGAGAGACAGCTTTGTTCGTCTCCGAGAATACATGGACACTCATGGCAGAACATCATCAGATGGAATGTCCTCTTTTTTGAGACAAGGTGGGTCAACATGGGGTGGTGGCAATCTAAGTAGTATGTCTGCTTCGGTATCAACCCTTGGGGACAGTGGATGGTTACTGCATGTTCAGAATGTGTTGGCTGGAGCAGCTTGGATTGCTGCTCGTGTTGCAATGGAAAACGCTTCTGTCCTTGTGCATTGCAGTGATGGATGGGATAGGACAAGCCAGTTGGTTTCACTTGCTAATTTGTTGCTTGATCCATATTATCGGACATTCACAGGGTTTCAGGCACTCATTGAAAAAGACTGGCTTGCTTTTGGTCATCCATTTTCTGATCGGGTGGGAATGCCATCTGTCTCTGGAACTGGCAACATGGCTTTTGAGTTATCTAGGCAGCCTTCAACCGGAAATTTCTCATCTTCACCCGGGCGCCAGTCATCAGGAACATTCTCATCACAACCTCCAGCTTCATCTCACTCACATAACTCCAACAACTATTCTCCTATTTTTTTGCAGTGGGTTGACTGTGTTTCACAATTATTGCGGATGTATCCTTTTGCTTTTCAGTTCTCTGCGGCCTTCCTGGTGGACTTCATAGACTGCATGCTTTCTTGTCGTTTTGGGAACTTCTTATGTAACAGTGAGAAGGAGAGGCAGCAATGCAATGTTTTTGAGGCATGTGGATGTCTGTGGGTATATTTAGCTGATTTGCGGACATCAGAAGGAGGTTCCCATGTGCATTACAATCCCTTCTATGATCCACTCAAGCATAATGGTCCTCTTCTGCCCCCAGCAGCAGCATTGGCCCCTACATTGTGGCCCCAATTCCACCTTCGTTGGGCATGCCCAGAAGAAGCACAAGCTGGGGAGATTGAAGCACAATGCAGGAAGATACTTATAAAATGCTCTGAGATGCAGAAGGGTAAAGAAATGGCAGAAAGAAAAGCTAAAGAAGTTACAAATTCCATGGAGTCATTGAATGCAGAATTACGACGGGAGAAGCAGCTAAACAACTCAGCTATGAACATGGCAAAGACTACGAGCAAAGAAAATATGGCCATAAAGCGTGCTATTCAGTCAATGGGGTGCAAGGTTCATGTCTCTGGTAGTGGTGAATGCACTGTTGACATTGAAAGCAACCCAGACATTCTGTGCTGTTCCTCTAGAAAAGAATCAAATAGTACTGTGCGTGATGACAAAACGGATCTGCCTGTTTCAGTACTAGTTACAGCAGATGATGTTGATGGAAACAGTGGGATTGTTCGGGTATGTGAAACTCTGTGCCCATTTGGCTCTGGAGGTGGAGGCTGCAGGTGGCCAAATGGTGGTTGTGCTCAACAAGGTAGCCAATATGTTGGCCTGAAGGCAAACTTCGATGCATTTGACCAATTGTCAATTGATGATAGTTATTTCAAGTCTGAGTGA 2544 0.4465 MDVPKHRATRTTSLRDASDSSKMEGTGSWDAIEWTKIEPIARFVSHANLDFLIEAEQVVAEGHGVVLVNTDDAGTLMVTNFRLIFLSEGTRKVISLGTIPLATIEKFNKMVVKVQSNSRHVDKTPAQRLLQVIGKDMRIIVFSFRPRTKQRRVVFDALLRCTKPARLWDLYAFASGPSRFNNTTPLVRLLDEYSRLLCLGSFCASIDIIENGSYTLSNDLWRISSVNSNYTMCQSYPFAFIVPKIISDDEVLQACSFRARCRLPVVSWCHPLTGAVVARSSQPLVGLMMNMRSNMDEKLVAALCSKLDNGSRRKLYIVDARPRKNALANGAMGGGSESSSNYFQSEVVFLGIDNIHAMRDSFVRLREYMDTHGRTSSDGMSSFLRQGGSTWGGGNLSSMSASVSTLGDSGWLLHVQNVLAGAAWIAARVAMENASVLVHCSDGWDRTSQLVSLANLLLDPYYRTFTGFQALIEKDWLAFGHPFSDRVGMPSVSGTGNMAFELSRQPSTGNFSSSPGRQSSGTFSSQPPASSHSHNSNNYSPIFLQWVDCVSQLLRMYPFAFQFSAAFLVDFIDCMLSCRFGNFLCNSEKERQQCNVFEACGCLWVYLADLRTSEGGSHVHYNPFYDPLKHNGPLLPPAAALAPTLWPQFHLRWACPEEAQAGEIEAQCRKILIKCSEMQKGKEMAERKAKEVTNSMESLNAELRREKQLNNSAMNMAKTTSKENMAIKRAIQSMGCKVHVSGSGECTVDIESNPDILCCSSRKESNSTVRDDKTDLPVSVLVTADDVDGNSGIVRVCETLCPFGSGGGGCRWPNGGCAQQGSQYVGLKANFDAFDQLSIDDSYFKSE* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1084 847 MobiDBLite consensus disorder prediction 505 535 - -
Pvu7g1084 847 Coils Coil 682 716 - -
Pvu7g1084 847 SUPERFAMILY PH domain-like 53 174 - -
Pvu7g1084 847 ProSitePatterns Tyrosine specific protein phosphatases active site. 438 448 IPR016130 GO:0016311|GO:0016791
Pvu7g1084 847 Gene3D - 63 162 IPR011993 -
Pvu7g1084 847 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 212 654 IPR029021 -
Pvu7g1084 847 Pfam Myotubularin-like phosphatase domain 171 592 IPR010569 -
Pvu7g1084 847 MobiDBLite consensus disorder prediction 1 26 - -
Pvu7g1084 847 CDD PTP-MTM-like 261 552 - -
Pvu7g1084 847 SMART gram2001c 41 111 IPR004182 -
Pvu7g1084 847 PANTHER MYOTUBULARIN-RELATED 19 846 IPR030564 -
Pvu7g1084 847 ProSiteProfiles Myotubularin phosphatase domain. 183 650 IPR010569 -
Pvu7g1084 847 PANTHER PHOSPHATIDYLINOSITOL-3-PHOSPHATASE MYOTUBULARIN-1 19 846 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1084 1 847 Protein tyrosine phosphatase (PTP) family AT3G10550 67.564 0.0 1155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1084 K18081 - gmx:100781842 1539.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g1084 7 12253621 12276728 Pvu7g1084 7 12253621 12276728 ECH