Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1083 ATGGCCACCGAAGACTTTCCCCTCCTCGACTCTCCCTCCCACGCGCAGCCTCACATCCACGCGCCCACGCTCCACCACTTCCCTTCCTCTTCCTCTTCTAGCCTCACCACTCTCCTCGCCGCCGATTCCGTCACCGCCGATTACTACCCCCACTCCTCCTTCTCTGACGACTCCGCCAAATCCGGCTCCAAACGCGCCTCCGCCGCCGGCAGTTCTTACTACCACAACAAGAAGCTCAAATCTGCCGCCCATTCAGATTCGAAAACCGATGGTACTTTCCGCCGCGGCAGCGATTATCGGAAGGATAGAGAAGATTGGAGCGACACGGCGATCGCGTGTCTATTGGAGGCGTACACGGATAAGTTCAACCAGCTGAACCGCGGCAACCTCCGTGGCCGTGACTGGGAGGAGGTGGCGGAGGCGGTGGGGGAACGGTGTGGCGGAGAGGTGAAGCATCAGAAGAGCGTGGAGCAATGTAAGAATAAGATTGATAATTTGAAGAAGAGGTATAAGGTGGAGCTTCAGAGAATTGGAAGTGATGGCATTGACACTAGTCACTGGCATTGGTTTAATAAAATTGAAGCTATTGTTGACACTAGTGCTGCTGATGTTAATTCCTCTTCTATGGCTAGACAAACCAAGAACAGATATGGCCCTAACAACGGTGTCGTGGCAAACAACCTTAAAACAAAACCGGAGTCAAATCTGAAATGGCAGAGAGTTCTGTTTAAAATTAGTGGCTCTGCACTGGCTGGAAACGGCCAGAATATTGACCCCAAGGTGGCAATGCAGATTGCTAGGGAAGTGGCAACAGCTTGCCGCCTTGGGGTGGAGGTAGCCATTGTTGTTGGTGGTAGTAACTTCTTTTGTGGAGATGCATGGGTATCTGCTACAGGGTTGGATAGACCTACGGCATACCAAATAGGAATGATGGCAACAGTCATGAATTCTATTTTACTTCAATCTGCTTTGGAGAAGCTGGGTGTCCAGGCACGTGTTCAGAGTGCATTCTCGATGCCTGAGGTTGCTGAACCATATAGCAGGCAACGATCTATTAGACACCTTGAGAAAGGAAGGGTCGTCATATTTGGTGGTGTTGGTGCTGGCATAGGAAATCCACTTTTTACCACCGATACAGCTGCAGTTCTCAGAGCTTCTGAGATTAATGCTGATGCGGTTCTGAAAGGTACTAATGTGAATGGTGTCTTTTTTGACTGCCATCCGGGCAATGATAATGCAACCCTTGATCGAATTTCCTTTAGGGAAGTCGTTTCTAGGGGCGTCGCAACCATGGATACGATGGCACTGGCATATTGTGAAGAGAATGGAATACCTGTTGTAGTTTTCAACATGCTTGAACCAGGGAATGTTTCAAGAGCTTTATGTGGAGATCAAGTTGGCACTTTGATCGAGCAAACCGGTAGAGTGGAGCATCAGCTTCCTAGTTAA 1449 0.4955 MATEDFPLLDSPSHAQPHIHAPTLHHFPSSSSSSLTTLLAADSVTADYYPHSSFSDDSAKSGSKRASAAGSSYYHNKKLKSAAHSDSKTDGTFRRGSDYRKDREDWSDTAIACLLEAYTDKFNQLNRGNLRGRDWEEVAEAVGERCGGEVKHQKSVEQCKNKIDNLKKRYKVELQRIGSDGIDTSHWHWFNKIEAIVDTSAADVNSSSMARQTKNRYGPNNGVVANNLKTKPESNLKWQRVLFKISGSALAGNGQNIDPKVAMQIAREVATACRLGVEVAIVVGGSNFFCGDAWVSATGLDRPTAYQIGMMATVMNSILLQSALEKLGVQARVQSAFSMPEVAEPYSRQRSIRHLEKGRVVIFGGVGAGIGNPLFTTDTAAVLRASEINADAVLKGTNVNGVFFDCHPGNDNATLDRISFREVVSRGVATMDTMALAYCEENGIPVVVFNMLEPGNVSRALCGDQVGTLIEQTGRVEHQLPS* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1083 482 Coils Coil 149 176 - -
Pvu7g1083 482 Gene3D - 106 172 - -
Pvu7g1083 482 SUPERFAMILY Carbamate kinase-like 237 471 IPR036393 -
Pvu7g1083 482 Hamap Uridylate kinase [pyrH]. 236 471 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pvu7g1083 482 SMART 118neu2 113 201 IPR006578 -
Pvu7g1083 482 MobiDBLite consensus disorder prediction 80 99 - -
Pvu7g1083 482 Pfam Myb/SANT-like DNA-binding domain 104 196 IPR044822 -
Pvu7g1083 482 PANTHER KINASE, PUTATIVE-RELATED 1 476 - -
Pvu7g1083 482 CDD AAK_UMPK-PyrH-Ec 239 471 IPR015963 GO:0005737|GO:0006221|GO:0033862
Pvu7g1083 482 Pfam Amino acid kinase family 240 450 IPR001048 -
Pvu7g1083 482 Gene3D - 229 478 IPR036393 -
Pvu7g1083 482 MobiDBLite consensus disorder prediction 1 32 - -
Pvu7g1083 482 PANTHER URIDYLATE KINASE 1 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1083 Pvu-Chr7 12212340 12216605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1083 103 201 Trihelix Transcription Factor Family AT3G14180 41.584 5.15e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu7g1083 AA_kinase 3.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1083 - - gmx:100791426 766.533