Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1074 ATGGGTGACCCATATGGGTTGCCGGAGGATCTCCGGCGTTTTATACCACCCAGAACCCATTTGAACCCTTCAAACACGCATCTACTTGAGCCACTGTGTCTTCACCATGGTCTTAGTGGTGTTGCTGCTGCTACCACAACTCCACCCAACACCTACGACCCTAACATGGTTGGGGACGTTTTCTTCCCTCGTGCCTTCACTCACTTTGCTCATCATCATGACTATTCCTCTTCTTCCGGTGTCCACCCTACTAATACTGCCACCGCTGCTGTCTCGGATCATGCATTCTGCAGCATGGAGAGTGCAGAGAAAGGGTGGTTTGGGTTTGATTCCGGGAACAACAGGTGGCCTAGACAGGAGACCCTTTCGCTTCTAGAGATCAGATCTCGTCTTGATTGCAAGTTCAGAGAGAATAATCAGAAAGCACCCTTGTGGAATGAGATTTCTAGGATAATGGCGGAGGAATTTGGGTACCAAAGAAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACGAAGGAAGGTAAAGGCAGTAGACAAGATGGGAAGCACTACAGGTTCTTCAGGCAGCTGGAAGCGATATGTGGAGACCAAGCAAACACAAATCATGCCTCAACTTCAGAGAAAGGCCAACGTGGTGGTGGAAACAATGCTAATATTCAAACACCTACCTTCACAGTTAACCAAGACCACAATGTGGATTCTAATAATAACCCCAAGTGCTCAGAGAGCCTGAGCATCACAAACTCATCTGAATTGGAGACATCCTCATCTGAAAACAACGAGGAGGATCTTTCAGCCATTGCATTCATGATGAGGCAGCCAAGGGAGAAGCAGAAAGCGTTGGATGAAAGACACAGTGATCACAGGAGGTTAAGAAAAAGCTGGAGAGCCAAAGTGGAGGAGATTGTGGATTCCCACATGAGGAAGATTATAGAGACTCAAGATGCTTGGATGGAGAGAATGTTGGGCGTTGTTGAACAAAGAGAGCAAGAGATGACATCTAAGGAGGAAGAAAGGAAGAGGAAAGAGTCAACGTGGTTTGACCAGCAGGTGCATGAACTGTGGGCTAAAGAGAAAGCATGGGTTGAAGCAAGAGATGCTGCATTGATAGAGGTTGTGAGGAAACACGTTGGGATAGGACTTGAAGCATTACCCCTAGATGAAGCTATGGTTGAAGAAGCAGCAAATAAGAACAAGGGCCAAGGAAAGATTGACAGCAGTGAATTTCCCTCGGAGGGTGTGGATCAAAGAAGTAGCAGTAGGTGGACAGAAATGGAGATTGCAAATTTGATACAGCTAAGGACTGGTTTTGAGCAACGATTCAGAGAAAATGGGTACTTGGAGAATGGCCTTTGGGATGAAATATCAGCAAAACTGGGTTGTTTGGGGTTTGATAGGAGTGGAAGTGAATGCAAGCAAATATGGGATGAGATCAGCATCTCTCTGAGAAGGACAGTGGATGAGTGTGATGGTGGGAAAAGAAGGCCTTGGTATTTGGGACTTAAGGTGACGGATGATGATGATCTTTGA 1554 0.4582 MGDPYGLPEDLRRFIPPRTHLNPSNTHLLEPLCLHHGLSGVAAATTTPPNTYDPNMVGDVFFPRAFTHFAHHHDYSSSSGVHPTNTATAAVSDHAFCSMESAEKGWFGFDSGNNRWPRQETLSLLEIRSRLDCKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKGSRQDGKHYRFFRQLEAICGDQANTNHASTSEKGQRGGGNNANIQTPTFTVNQDHNVDSNNNPKCSESLSITNSSELETSSSENNEEDLSAIAFMMRQPREKQKALDERHSDHRRLRKSWRAKVEEIVDSHMRKIIETQDAWMERMLGVVEQREQEMTSKEEERKRKESTWFDQQVHELWAKEKAWVEARDAALIEVVRKHVGIGLEALPLDEAMVEEAANKNKGQGKIDSSEFPSEGVDQRSSSRWTEMEIANLIQLRTGFEQRFRENGYLENGLWDEISAKLGCLGFDRSGSECKQIWDEISISLRRTVDECDGGKRRPWYLGLKVTDDDDL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1074 517 CDD GT1 114 180 - -
Pvu7g1074 517 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 31 501 - -
Pvu7g1074 517 MobiDBLite consensus disorder prediction 408 426 - -
Pvu7g1074 517 ProSiteProfiles Myb-like domain profile. 114 173 IPR001005 -
Pvu7g1074 517 PANTHER - 31 501 - -
Pvu7g1074 517 SMART sant 426 489 IPR001005 -
Pvu7g1074 517 SMART sant 112 175 IPR001005 -
Pvu7g1074 517 ProSiteProfiles Myb-like domain profile. 422 487 IPR001005 -
Pvu7g1074 517 MobiDBLite consensus disorder prediction 403 426 - -
Pvu7g1074 517 CDD GT1 428 493 - -
Pvu7g1074 517 Coils Coil 333 353 - -
Pvu7g1074 517 MobiDBLite consensus disorder prediction 206 268 - -
Pvu7g1074 517 Pfam Myb/SANT-like DNA-binding domain 428 499 IPR044822 -
Pvu7g1074 517 Pfam Myb/SANT-like DNA-binding domain 114 201 IPR044822 -
Pvu7g1074 517 Gene3D - 430 492 - -
Pvu7g1074 517 Gene3D - 116 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1074 Pvu-Chr7 12006911 12009639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1074 115 492 Trihelix Transcription Factor Family AT5G03680 45.340 2.90e-90 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu7g1074 Myb_DNA-bind_4 4.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1074 - - gmx:100787750 824.313