Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g1051 ATGGAAGAGGTGATGAAGGTAGCCAATGTTGGAGAAAGCCAAAGAGAATATGCATCCAGAGTTTTTCCATGCCTATTCTGTTCAAGAAAGTTTTACAGTTCTCAAGCTCTGGGAGGACACCAAAATGCTCACAAGAAAGAAAGAACAGCTGCAAGGAAGGCTAAGAGGGCTTATGAGTACTCAAGTGTTTCTTTCCCTTCCCCACTGCCAGCCCCTGTGATTTTTGCTCCAACCCATCTTGACATTTTAAATCCTTCAATGTTGATCACTGCCCATGCAGCAGAACTCCCTTATCTCCAAAGCCATCAAATTTCTGTACAATTTGGATCAAACGGTGCACCTAGATTTGGCAATGCACTGTTCTATGGGGGAACCAACAGGTTACATGGTGATGGAAAGAGCTATAGCATCAGCTGGGGGGGCACATCTCAACCCAAGTCATTGACAAGCAACGATCAAAATCTTGAACTTTGGAATAATGACACAGAGAAGGATCAAATGATTGATTTATCTCTCCATTTATAG 525 0.4286 MEEVMKVANVGESQREYASRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRAYEYSSVSFPSPLPAPVIFAPTHLDILNPSMLITAHAAELPYLQSHQISVQFGSNGAPRFGNALFYGGTNRLHGDGKSYSISWGGTSQPKSLTSNDQNLELWNNDTEKDQMIDLSLHL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g1051 174 PANTHER PROTEIN LATE FLOWERING 10 174 - -
Pvu7g1051 174 Gene3D Classic Zinc Finger 2 66 - -
Pvu7g1051 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 22 49 IPR013087 -
Pvu7g1051 174 ProSitePatterns Zinc finger C2H2 type domain signature. 24 44 IPR013087 -
Pvu7g1051 174 PANTHER ZINC FINGER PROTEIN JAGGED 10 174 IPR045320 GO:0003700
Pvu7g1051 174 SUPERFAMILY beta-beta-alpha zinc fingers 19 49 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g1051 Pvu-Chr7 11565034 11565558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g1051 2 174 C2H2 Transcription Factor Family AT5G48890 41.667 9.96e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g1051 - - vra:106759055 278.87